Lineage for Family e.8.1.4: RNA-dependent RNA-polymerase

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3017418Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

Proteins:

  1. 3017419Reovirus polymerase lambda3 [82841] (1 species)
    contains additional N-terminal domain (res. 1-380) and C-terminal "bracelet" domain (res. 891-1267)
  2. 3017426Viral RNA polymerase [56695] (17 species)
    1. 3017427Species Avian infectious bursal disease virus [TaxId:10995] [160955] (1 PDB entry)
      Uniprot Q9Q6Q5 31-804
    2. 3017429Species Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries)
    3. 3017436Species Foot-and-mouth disease virus - type c [TaxId:12116] [187085] (9 PDB entries)
    4. 3017446Species Foot-and-mouth disease virus [TaxId:12110] [111302] (7 PDB entries)
      Uniprot Q9QCE4 1858-2327
    5. 3017456Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [195056] (4 PDB entries)
    6. 3017465Species Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId:356411] [193797] (3 PDB entries)
    7. 3017469Species Hepatitis C virus subtype 1a [TaxId:31646] [189928] (4 PDB entries)
    8. 3017476Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries)
    9. 3017613Species Hepatitis C virus [TaxId:420174] [188905] (22 PDB entries)
    10. 3017656Species Human poliovirus 1 [TaxId:12081] [256393] (8 PDB entries)
    11. 3017665Species Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (2 PDB entries)
      Uniprot P03303 1720-2179
    12. 3017668Species Human rhinovirus 16 [TaxId:31708] [188024] (2 PDB entries)
    13. 3017676Species Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (2 PDB entries)
      Uniprot Q82122 1694-2153
    14. 3017681Species Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (2 PDB entries)
      Uniprot P12916 1698-2157
    15. 3017684Species Norwalk virus [TaxId:11983] [103400] (8 PDB entries)
    16. 3017695Species Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (12 PDB entries)
      Uniprot P03300 1748-2208
    17. 3017727Species Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries)
  3. 3017732automated matches [190260] (25 species)
    not a true protein
    1. 3017733Species Bovine viral diarrhea virus [TaxId:11099] [255087] (1 PDB entry)
    2. 3017735Species Coxsackievirus b3 [TaxId:103903] [188493] (5 PDB entries)
    3. 3017741Species Coxsackievirus b3 [TaxId:12072] [271111] (10 PDB entries)
    4. 3017752Species Enterovirus d68 [TaxId:42789] [336371] (3 PDB entries)
    5. 3017756Species Foot-and-mouth disease virus [TaxId:12120] [272422] (2 PDB entries)
    6. 3017759Species Hepacivirus c [TaxId:11103] [360486] (4 PDB entries)
    7. 3017765Species Hepatitis B virus [TaxId:10407] [259720] (1 PDB entry)
    8. 3017767Species Hepatitis C virus (isolate 1) [TaxId:11104] [261697] (1 PDB entry)
    9. 3017769Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [188687] (17 PDB entries)
    10. 3017803Species Hepatitis C virus genotype 1b (isolate con1) [TaxId:333284] [188792] (8 PDB entries)
    11. 3017819Species Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId:356411] [189047] (4 PDB entries)
    12. 3017827Species Hepatitis C virus isolate hc-j6 [TaxId:11113] [189608] (1 PDB entry)
    13. 3017829Species Hepatitis C virus isolate hc-j8 [TaxId:11115] [188981] (2 PDB entries)
    14. 3017834Species Hepatitis C virus subtype 1a [TaxId:31646] [189338] (1 PDB entry)
    15. 3017838Species Hepatitis C virus subtype 1b [TaxId:31647] [187148] (6 PDB entries)
    16. 3017853Species Hepatitis C virus [TaxId:11103] [187048] (44 PDB entries)
    17. 3017946Species Hepatitis C virus [TaxId:420174] [189885] (5 PDB entries)
    18. 3017956Species Human coxsackievirus B3 [TaxId:12072] [193138] (3 PDB entries)
    19. 3017969Species Human coxsackievirus [TaxId:12072] [188608] (1 PDB entry)
    20. 3017971Species Human enterovirus 71 [TaxId:39054] [189988] (4 PDB entries)
    21. 3017976Species Human poliovirus 1 [TaxId:12081] [193135] (16 PDB entries)
    22. 3017998Species Human rhinovirus a16 [TaxId:31708] [193142] (1 PDB entry)
    23. 3018000Species Murine norovirus 1 [TaxId:223997] [189982] (9 PDB entries)
    24. 3018034Species Murine norovirus [TaxId:223997] [226374] (2 PDB entries)
    25. 3018041Species Norwalk-like virus [TaxId:95340] [260334] (1 PDB entry)

More info for Family e.8.1.4: RNA-dependent RNA-polymerase

Timeline for Family e.8.1.4: RNA-dependent RNA-polymerase: