Lineage for Species: Hepatitis C virus [TaxId: 11103]

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3017418Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 3017732Protein automated matches [190260] (25 species)
    not a true protein
  7. 3017853Species Hepatitis C virus [TaxId:11103] [187048] (44 PDB entries)

PDB entries in Species: Hepatitis C virus [TaxId: 11103]:

  1. Domain(s) for 1yuy:
  2. Domain(s) for 1yv2:
  3. Domain(s) for 1yvf:
    • 3017919Domain d1yvfa_: 1yvf A: [162311]
      automated match to d1nb4a_
      protein/RNA complex; complexed with cl, gol, ph7, po4
  4. Domain(s) for 1yvx:
  5. Domain(s) for 1yvz:
  6. Domain(s) for 1z4u:
    • 3017937Domain d1z4ua_: 1z4u A: [162385]
      automated match to d1nb4a_
      protein/RNA complex; complexed with cl, gol, ph9, po4
  7. Domain(s) for 2awz:
    1. 3017884Domain d2awza_: 2awz A: [162937]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5h, so4
    2. 3017885Domain d2awzb_: 2awz B: [162938]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5h, so4
  8. Domain(s) for 2ax0:
    1. 3017873Domain d2ax0a_: 2ax0 A: [162939]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5x, so4
    2. 3017874Domain d2ax0b_: 2ax0 B: [162940]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5x, so4
  9. Domain(s) for 2ax1:
    1. 3017878Domain d2ax1a_: 2ax1 A: [162941]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5ee, so4
    2. 3017879Domain d2ax1b_: 2ax1 B: [162942]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 5ee, so4
  10. Domain(s) for 2d3u:
    1. 3017910Domain d2d3ua_: 2d3u A: [131232]
      automated match to d1nb4a_
      protein/RNA complex; complexed with cct
    2. 3017911Domain d2d3ub_: 2d3u B: [131233]
      automated match to d1nb4a_
      protein/RNA complex; complexed with cct
  11. Domain(s) for 2d3z:
    1. 3017862Domain d2d3za_: 2d3z A: [131234]
      automated match to d1nb4a_
      protein/RNA complex; complexed with fih
    2. 3017863Domain d2d3zb_: 2d3z B: [131235]
      automated match to d1nb4a_
      protein/RNA complex; complexed with fih
  12. Domain(s) for 2d41:
    1. 3017882Domain d2d41a_: 2d41 A: [131236]
      automated match to d1nb4a_
      protein/RNA complex; complexed with snh
    2. 3017883Domain d2d41b_: 2d41 B: [131237]
      automated match to d1nb4a_
      protein/RNA complex; complexed with snh
  13. Domain(s) for 2dxs:
    1. 3017894Domain d2dxsa_: 2dxs A: [204047]
      automated match to d3vqsd_
      protein/RNA complex; complexed with jtp
    2. 3017895Domain d2dxsb_: 2dxs B: [204048]
      automated match to d3vqsd_
      protein/RNA complex; complexed with jtp
  14. Domain(s) for 2gc8:
    1. 3017892Domain d2gc8a_: 2gc8 A: [134970]
      automated match to d1nb4a_
      complexed with 885
    2. 3017893Domain d2gc8b_: 2gc8 B: [134971]
      automated match to d1nb4a_
      complexed with 885
  15. Domain(s) for 2hwh:
    1. 3017906Domain d2hwha2: 2hwh A:3-564 [136822]
      Other proteins in same PDB: d2hwha3, d2hwhb3
      automated match to d1c2pb_
      protein/RNA complex; complexed with rna
    2. 3017907Domain d2hwhb2: 2hwh B:3-566 [136823]
      Other proteins in same PDB: d2hwha3, d2hwhb3
      automated match to d1c2pb_
      protein/RNA complex; complexed with rna
  16. Domain(s) for 2hwi:
    1. 3017880Domain d2hwia2: 2hwi A:3-564 [136824]
      Other proteins in same PDB: d2hwia3, d2hwib3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vrx
    2. 3017881Domain d2hwib2: 2hwi B:3-566 [136825]
      Other proteins in same PDB: d2hwia3, d2hwib3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vrx
  17. Domain(s) for 2i1r:
    1. 3017904Domain d2i1ra2: 2i1r A:3-564 [136986]
      Other proteins in same PDB: d2i1ra3, d2i1rb3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vxr
    2. 3017905Domain d2i1rb2: 2i1r B:3-566 [136987]
      Other proteins in same PDB: d2i1ra3, d2i1rb3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vxr
  18. Domain(s) for 2jc0:
    1. 3017886Domain d2jc0a_: 2jc0 A: [165991]
      automated match to d1nb4a_
      complexed with 699
    2. 3017887Domain d2jc0b_: 2jc0 B: [165992]
      automated match to d1nb4a_
      complexed with 699
  19. Domain(s) for 2jc1:
    1. 3017871Domain d2jc1a_: 2jc1 A: [165993]
      automated match to d1nb4a_
      complexed with 698
    2. 3017872Domain d2jc1b_: 2jc1 B: [165994]
      automated match to d1nb4a_
      complexed with 698
  20. Domain(s) for 2o5d:
    1. 3017890Domain d2o5da2: 2o5d A:3-564 [138918]
      Other proteins in same PDB: d2o5da3, d2o5db3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vr1
    2. 3017891Domain d2o5db2: 2o5d B:3-566 [138919]
      Other proteins in same PDB: d2o5da3, d2o5db3
      automated match to d1c2pb_
      protein/RNA complex; complexed with vr1
  21. Domain(s) for 2xhu:
    1. 3017888Domain d2xhua_: 2xhu A: [170098]
      automated match to d1nb4a_
      complexed with so4
    2. 3017889Domain d2xhub_: 2xhu B: [170099]
      automated match to d1nb4a_
      complexed with so4
  22. Domain(s) for 2xhv:
    1. 3017864Domain d2xhva_: 2xhv A: [170100]
      automated match to d1nb4a_
      complexed with mg, so4; mutant
    2. 3017865Domain d2xhvb_: 2xhv B: [170101]
      automated match to d1nb4a_
      complexed with mg, so4; mutant
  23. Domain(s) for 2xhw:
  24. Domain(s) for 2xi2:
    1. 3017856Domain d2xi2a_: 2xi2 A: [170103]
      automated match to d1nb4a_
      complexed with so4
    2. 3017857Domain d2xi2b_: 2xi2 B: [170104]
      automated match to d1nb4a_
      complexed with so4
    3. 3017858Domain d2xi2c_: 2xi2 C: [170105]
      automated match to d1nb4a_
      complexed with so4
  25. Domain(s) for 2xi3:
    1. 3017854Domain d2xi3a_: 2xi3 A: [170106]
      automated match to d1nb4a_
      complexed with gtp, mg
    2. 3017855Domain d2xi3b_: 2xi3 B: [170107]
      automated match to d1nb4a_
      complexed with gtp, mg
  26. Domain(s) for 2xwy:
  27. Domain(s) for 2xxd:
  28. Domain(s) for 3br9:
    1. 3017896Domain d3br9a_: 3br9 A: [172796]
      automated match to d1nb4a_
      protein/RNA complex; complexed with dey
    2. 3017897Domain d3br9b_: 3br9 B: [172797]
      automated match to d1nb4a_
      protein/RNA complex; complexed with dey
  29. Domain(s) for 3cde:
    1. 3017876Domain d3cdea_: 3cde A: [173147]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n3h
    2. 3017877Domain d3cdeb_: 3cde B: [173148]
      automated match to d1nb4a_
      protein/RNA complex; complexed with n3h
  30. Domain(s) for 3cwj:
    1. 3017914Domain d3cwja_: 3cwj A: [173515]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 321
    2. 3017915Domain d3cwjb_: 3cwj B: [173516]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 321
  31. Domain(s) for 3phe:
    1. 3017900Domain d3phea_: 3phe A: [183740]
      automated match to d1nb4a_
      protein/RNA complex; complexed with c9a
    2. 3017901Domain d3pheb_: 3phe B: [183741]
      automated match to d1nb4a_
      protein/RNA complex; complexed with c9a
    3. 3017902Domain d3phec_: 3phe C: [183742]
      automated match to d1nb4a_
      protein/RNA complex; complexed with c9a
    4. 3017903Domain d3phed_: 3phe D: [183743]
      automated match to d1nb4a_
      protein/RNA complex; complexed with c9a
  32. Domain(s) for 3vqs:
    1. 3017866Domain d3vqsa_: 3vqs A: [194829]
      automated match to d3gnwb_
      protein/RNA complex; complexed with cl, jt1
    2. 3017867Domain d3vqsb_: 3vqs B: [194831]
      automated match to d3gnwb_
      protein/RNA complex; complexed with cl, jt1
    3. 3017868Domain d3vqsc_: 3vqs C: [194828]
      automated match to d3gnwb_
      protein/RNA complex; complexed with cl, jt1
    4. 3017869Domain d3vqsd_: 3vqs D: [194830]
      automated match to d3gnwb_
      protein/RNA complex; complexed with cl, jt1
  33. Domain(s) for 4adp:
  34. Domain(s) for 4aep:
  35. Domain(s) for 4aex:
    1. 3017898Domain d4aexa_: 4aex A: [195482]
      automated match to d3gnwb_
      complexed with po4
    2. 3017899Domain d4aexb_: 4aex B: [195481]
      automated match to d3gnwb_
      complexed with po4
  36. Domain(s) for 4txs:
    1. 3017933Domain d4txsa_: 4txs A: [272392]
      automated match to d4mz4a_
      complexed with 3aq
    2. 3017934Domain d4txsb_: 4txs B: [272394]
      automated match to d4mz4a_
      complexed with 3aq
    3. 3017935Domain d4txsc_: 4txs C: [272393]
      automated match to d4mz4a_
      complexed with 3aq
    4. 3017936Domain d4txsd_: 4txs D: [272395]
      automated match to d4mz4a_
      complexed with 3aq
  37. Domain(s) for 4ty8:
    1. 3017929Domain d4ty8a_: 4ty8 A: [272390]
      automated match to d4mz4a_
      complexed with 3av
    2. 3017930Domain d4ty8b_: 4ty8 B: [272388]
      automated match to d4mz4a_
      complexed with 3av
    3. 3017931Domain d4ty8c_: 4ty8 C: [272396]
      automated match to d4mz4a_
      complexed with 3av
    4. 3017932Domain d4ty8d_: 4ty8 D: [272389]
      automated match to d4mz4a_
      complexed with 3av
  38. Domain(s) for 4ty9:
    1. 3017925Domain d4ty9a_: 4ty9 A: [272397]
      automated match to d4mz4a_
      complexed with 3b0
    2. 3017926Domain d4ty9b_: 4ty9 B: [272401]
      automated match to d4mz4a_
      complexed with 3b0
    3. 3017927Domain d4ty9c_: 4ty9 C: [272402]
      automated match to d4mz4a_
      complexed with 3b0
    4. 3017928Domain d4ty9d_: 4ty9 D: [272403]
      automated match to d4mz4a_
      complexed with 3b0
  39. Domain(s) for 4tya:
    1. 3017942Domain d4tyaa_: 4tya A: [272391]
      automated match to d4mz4a_
      complexed with 3ae
    2. 3017943Domain d4tyab_: 4tya B: [272398]
      automated match to d4mz4a_
      complexed with 3ae
    3. 3017944Domain d4tyac_: 4tya C: [272400]
      automated match to d4mz4a_
      complexed with 3ae
    4. 3017945Domain d4tyad_: 4tya D: [272399]
      automated match to d4mz4a_
      complexed with 3ae
  40. Domain(s) for 4tyb:
    1. 3017938Domain d4tyba_: 4tyb A: [272995]
      automated match to d3qgda_
      complexed with 3b1
    2. 3017939Domain d4tybb_: 4tyb B: [272997]
      automated match to d3qgda_
      complexed with 3b1
    3. 3017940Domain d4tybc_: 4tyb C: [272996]
      automated match to d3qgda_
      complexed with 3b1
    4. 3017941Domain d4tybd_: 4tyb D: [272998]
      automated match to d3qgda_
      complexed with 3b1
  41. Domain(s) for 5trh:
    1. 3017923Domain d5trha_: 5trh A: [326834]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hl, so4
    2. 3017924Domain d5trhb_: 5trh B: [326813]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hl, so4
  42. Domain(s) for 5tri:
    1. 3017917Domain d5tria_: 5tri A: [326814]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hm, so4
    2. 3017918Domain d5trib_: 5tri B: [326822]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hm, so4
  43. Domain(s) for 5trj:
    1. 3017920Domain d5trja_: 5trj A: [326765]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7ho, so4
    2. 3017921Domain d5trjb_: 5trj B: [326797]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7ho, so4
  44. Domain(s) for 5trk:
    1. 3017912Domain d5trka_: 5trk A: [326763]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hh, so4
    2. 3017913Domain d5trkb_: 5trk B: [326821]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 7hh, so4

More info for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 automated matches

Timeline for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 automated matches: