Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein Viral RNA polymerase [56695] (17 species) |
Avian infectious bursal disease virus [TaxId:10995] [160955] (1 PDB entry) Uniprot Q9Q6Q5 31-804 |
Domain d2pgga1: 2pgg A:31-804 [149462] |
Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries) |
Domain d1s48a_: 1s48 A: [98475] |
Domain d1s49a_: 1s49 A: [98476] protein/RNA complex; complexed with gtp |
Domain d1s4fa_: 1s4f A: [98495] |
Domain d1s4fb_: 1s4f B: [98496] |
Domain d1s4fc_: 1s4f C: [98497] |
Domain d1s4fd_: 1s4f D: [98498] |
Foot-and-mouth disease virus - type c [TaxId:12116] [187085] (9 PDB entries) |
Domain d2f8ex2: 2f8e X:1-470 [133121] Other proteins in same PDB: d2f8ex3 automated match to d1u09a_ protein/RNA complex; complexed with mg, mn, u5p missing some secondary structures that made up less than one-third of the common domain |
Domain d3klva1: 3klv A:1-470 [179431] Other proteins in same PDB: d3klva2 automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3kmqa1: 3kmq A:1-470 [179454] Other proteins in same PDB: d3kmqa2 automated match to d1u09a_ protein/RNA complex; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3kmsa1: 3kms A:1-470 [179455] Other proteins in same PDB: d3kmsa2 automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3knaa1: 3kna A:1-470 [179469] Other proteins in same PDB: d3knaa2 automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3koaa1: 3koa A:1-470 [179502] Other proteins in same PDB: d3koaa2 automated match to d1u09a_ protein/RNA complex; complexed with dpo, mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3nkya1: 3nky A:1-470 [182353] Other proteins in same PDB: d3nkya2 automated match to d1u09a_ complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3nl0a1: 3nl0 A:1-470 [193696] Other proteins in same PDB: d3nl0a2 automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d3nmaa1: 3nma A:1-470 [182396] Other proteins in same PDB: d3nmaa2 automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant missing some secondary structures that made up less than one-third of the common domain |
Foot-and-mouth disease virus [TaxId:12110] [111302] (7 PDB entries) Uniprot Q9QCE4 1858-2327 |
Domain d1u09a1: 1u09 A:1-470 [107545] Other proteins in same PDB: d1u09a2 protein/DNA complex; protein/RNA complex missing some secondary structures that made up less than one-third of the common domain |
Domain d1wnea1: 1wne A:1-470 [109434] Other proteins in same PDB: d1wnea2 protein/DNA complex; protein/RNA complex; complexed with mg missing some secondary structures that made up less than one-third of the common domain |
Domain d2d7sa1: 2d7s A:1-470 [131326] Other proteins in same PDB: d2d7sa2 automatically matched to d1u09a_ protein/RNA complex missing some secondary structures that made up less than one-third of the common domain |
Domain d2e9rx2: 2e9r X:1-470 [146732] Other proteins in same PDB: d2e9rx3 automated match to d1u09a_ protein/RNA complex; complexed with mg, rtp missing some secondary structures that made up less than one-third of the common domain |
Domain d2e9ta2: 2e9t A:1-470 [146733] Other proteins in same PDB: d2e9ta3, d2e9td3 automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv missing some secondary structures that made up less than one-third of the common domain |
Domain d2e9td2: 2e9t D:1-470 [146734] Other proteins in same PDB: d2e9ta3, d2e9td3 automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv missing some secondary structures that made up less than one-third of the common domain |
Domain d2e9za2: 2e9z A:1-470 [146753] Other proteins in same PDB: d2e9za3 automated match to d3nmaa_ protein/RNA complex; complexed with mg, ppv, utp missing some secondary structures that made up less than one-third of the common domain |
Domain d2ec0a_: 2ec0 A: [146776] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv missing some secondary structures that made up less than one-third of the common domain |
Domain d2ec0d_: 2ec0 D: [146777] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv missing some secondary structures that made up less than one-third of the common domain |
Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [195056] (4 PDB entries) |
Domain d2giqa1: 2giq A:2-562 [164724] Other proteins in same PDB: d2giqa2, d2giqb2 automated match to d1nb4a_ complexed with nn2 |
Domain d2giqb1: 2giq B:2-562 [164725] Other proteins in same PDB: d2giqa2, d2giqb2 automated match to d1nb4a_ complexed with nn2 |
Domain d2gira1: 2gir A:2-562 [164726] Other proteins in same PDB: d2gira2, d2girb2 automated match to d1nb4a_ complexed with nn3 |
Domain d2girb1: 2gir B:2-562 [164727] Other proteins in same PDB: d2gira2, d2girb2 automated match to d1nb4a_ complexed with nn3 |
Domain d4eo6a1: 4eo6 A:3-562 [201886] Other proteins in same PDB: d4eo6a2, d4eo6b2 automated match to d4eo6b_ protein/RNA complex; complexed with 0s2 |
Domain d4eo6b1: 4eo6 B:3-565 [195057] Other proteins in same PDB: d4eo6a2, d4eo6b2 automated match to d3gnwb_ protein/RNA complex; complexed with 0s2 |
Domain d4eo8a1: 4eo8 A:3-562 [220755] Other proteins in same PDB: d4eo8a2, d4eo8b2 automated match to d4eo6b_ protein/RNA complex; complexed with 0s3 |
Domain d4eo8b1: 4eo8 B:3-565 [220756] Other proteins in same PDB: d4eo8a2, d4eo8b2 automated match to d4eo6b_ protein/RNA complex; complexed with 0s3 |
Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId:356411] [193797] (3 PDB entries) |
Domain d4e76a1: 4e76 A:1-551 [220341] Other proteins in same PDB: d4e76a2 automated match to d4e78a_ complexed with edo, so4 |
Domain d4e78a1: 4e78 A:1-545 [193798] Other proteins in same PDB: d4e78a2 automated match to d3gnwb_ protein/RNA complex |
Domain d5twma_: 5twm A: [331360] automated match to d3q0za_ protein/RNA complex; complexed with 7ng, pe5, pg4, so4 |
Hepatitis C virus subtype 1a [TaxId:31646] [189928] (4 PDB entries) |
Domain d3qgha_: 3qgh A: [184375] automated match to d1nb4a_ protein/RNA complex; complexed with 63f, po4 |
Domain d3qgia_: 3qgi A: [184376] automated match to d1nb4a_ protein/RNA complex; complexed with 33f, gol |
Domain d4khma_: 4khm A: [197116] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv, so4 |
Domain d4khmb_: 4khm B: [197206] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv, so4 |
Domain d4khra_: 4khr A: [197207] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv, so4 |
Domain d4khrb_: 4khr B: [202851] automated match to d4khra_ protein/RNA complex; complexed with 1pv, so4 |
Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries) |
Domain d1c2pa1: 1c2p A:3-563 [43117] Other proteins in same PDB: d1c2pa2, d1c2pb2 |
Domain d1c2pb1: 1c2p B:3-566 [43118] Other proteins in same PDB: d1c2pa2, d1c2pb2 |
Domain d1csja_: 1csj A: [43120] |
Domain d1csjb_: 1csj B: [43121] |
Domain d1gx5a_: 1gx5 A: [70682] protein/RNA complex; complexed with gtp, mn |
Domain d1gx6a_: 1gx6 A: [70683] protein/RNA complex; complexed with mn, utp |
Domain d1nb4a_: 1nb4 A: [85509] |
Domain d1nb4b_: 1nb4 B: [85510] |
Domain d1nb6a_: 1nb6 A: [85511] protein/RNA complex; complexed with mn, utp |
Domain d1nb6b_: 1nb6 B: [85512] protein/RNA complex; complexed with mn, utp |
Domain d1nb7a_: 1nb7 A: [85513] protein/RNA complex; complexed with mn |
Domain d1nb7b_: 1nb7 B: [85514] protein/RNA complex; complexed with mn |
Domain d1nhua_: 1nhu A: [85723] protein/RNA complex; complexed with 153 |
Domain d1nhub_: 1nhu B: [85724] protein/RNA complex; complexed with 153 |
Domain d1nhva_: 1nhv A: [85725] protein/RNA complex; complexed with 154 |
Domain d1nhvb_: 1nhv B: [85726] protein/RNA complex; complexed with 154 |
Domain d1os5a_: 1os5 A: [93475] protein/RNA complex; complexed with nh1 |
Domain d1quva_: 1quv A: [43119] |
Domain d2brka_: 2brk A: [129001] automated match to d1gx5a_ protein/RNA complex; complexed with cmf, mn |
Domain d2brla_: 2brl A: [203633] automated match to d1gx5a_ protein/RNA complex; complexed with mn, poo |
Domain d2fvca_: 2fvc A: [164476] automated match to d1nb4a_ complexed with 888 |
Domain d2fvcb_: 2fvc B: [164477] automated match to d1nb4a_ complexed with 888 |
Domain d2haia_: 2hai A: [165036] automated match to d1nb4a_ protein/RNA complex; complexed with pfi |
Domain d2qe2a_: 2qe2 A: [167555] automated match to d1nb4a_ complexed with 452 |
Domain d2qe2b_: 2qe2 B: [167556] automated match to d1nb4a_ complexed with 452 |
Domain d2qe5a_: 2qe5 A: [167559] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5b_: 2qe5 B: [167560] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5c_: 2qe5 C: [167561] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5d_: 2qe5 D: [167562] automated match to d1nb4a_ complexed with 617 |
Domain d2whoa_: 2who A: [206824] automated match to d1gx5a_ protein/RNA complex; complexed with mn, vgi |
Domain d2whob_: 2who B: [206825] automated match to d1gx5a_ protein/RNA complex; complexed with mn, vgi |
Domain d2wrma_: 2wrm A: [206983] automated match to d1gx5a_ complexed with qq3 |
Domain d2zkua_: 2zku A: [171292] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkub_: 2zku B: [171293] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkuc_: 2zku C: [171294] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkud_: 2zku D: [171295] automated match to d1nb4a_ complexed with acy, gol |
Domain d3ciza1: 3ciz A:2-563 [173264] Other proteins in same PDB: d3ciza2, d3cizb2 automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
Domain d3cizb1: 3ciz B:2-564 [173265] Other proteins in same PDB: d3ciza2, d3cizb2 automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
Domain d3cj0a1: 3cj0 A:2-563 [173266] Other proteins in same PDB: d3cj0a2, d3cj0b2 automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
Domain d3cj0b1: 3cj0 B:2-563 [173267] Other proteins in same PDB: d3cj0a2, d3cj0b2 automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
Domain d3cj2a1: 3cj2 A:2-562 [173268] Other proteins in same PDB: d3cj2a2, d3cj2b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
Domain d3cj2b1: 3cj2 B:2-562 [173269] Other proteins in same PDB: d3cj2a2, d3cj2b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
Domain d3cj3a1: 3cj3 A:2-563 [173270] Other proteins in same PDB: d3cj3a2, d3cj3b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
Domain d3cj3b1: 3cj3 B:2-563 [173271] Other proteins in same PDB: d3cj3a2, d3cj3b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
Domain d3cj4a1: 3cj4 A:2-562 [173272] Other proteins in same PDB: d3cj4a2, d3cj4b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
Domain d3cj4b1: 3cj4 B:2-562 [173273] Other proteins in same PDB: d3cj4a2, d3cj4b2 automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
Domain d3cj5a1: 3cj5 A:2-563 [173274] Other proteins in same PDB: d3cj5a2, d3cj5b2 automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
Domain d3cj5b1: 3cj5 B:2-564 [173275] Other proteins in same PDB: d3cj5a2, d3cj5b2 automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
Domain d3frza_: 3frz A: [176007] automated match to d1nb4a_ protein/RNA complex; complexed with ag0, ag6, bme |
Domain d3h59a1: 3h59 A:2-562 [177195] Other proteins in same PDB: d3h59a2, d3h59b2 automated match to d1nb4a_ complexed with h59 |
Domain d3h59b1: 3h59 B:2-562 [177196] Other proteins in same PDB: d3h59a2, d3h59b2 automated match to d1nb4a_ complexed with h59 |
Domain d3h5sa1: 3h5s A:2-562 [177201] Other proteins in same PDB: d3h5sa2, d3h5sb2 automated match to d1nb4a_ complexed with h5s |
Domain d3h5sb1: 3h5s B:2-562 [177202] Other proteins in same PDB: d3h5sa2, d3h5sb2 automated match to d1nb4a_ complexed with h5s |
Domain d3h5ua1: 3h5u A:2-563 [177203] Other proteins in same PDB: d3h5ua2, d3h5ub2 automated match to d1nb4a_ complexed with h5u |
Domain d3h5ub1: 3h5u B:2-563 [177204] Other proteins in same PDB: d3h5ua2, d3h5ub2 automated match to d1nb4a_ complexed with h5u |
Domain d3hkya1: 3hky A:1-563 [177660] Other proteins in same PDB: d3hkya2 automated match to d1nb4a_ complexed with cl, ix6, so4 |
Domain d3hkyb_: 3hky B: [177661] Other proteins in same PDB: d3hkya2 automated match to d1nb4a_ complexed with cl, ix6, so4 |
Domain d3lkha_: 3lkh A: [180342] automated match to d1nb4a_ complexed with lt6 |
Domain d3lkhb_: 3lkh B: [180343] automated match to d1nb4a_ complexed with lt6 |
Domain d3mf5a1: 3mf5 A:2-562 [181043] Other proteins in same PDB: d3mf5a2, d3mf5b2 automated match to d1c2pb_ complexed with gol, hjz |
Domain d3mf5b1: 3mf5 B:2-562 [181044] Other proteins in same PDB: d3mf5a2, d3mf5b2 automated match to d1c2pb_ complexed with gol, hjz |
Domain d3mwva_: 3mwv A: [181653] automated match to d1nb4a_ |
Domain d3mwvb_: 3mwv B: [181654] automated match to d1nb4a_ |
Domain d3mwwa_: 3mww A: [181655] automated match to d1nb4a_ complexed with biw, so4 |
Domain d3mwwb_: 3mww B: [181656] automated match to d1nb4a_ complexed with biw, so4 |
Domain d3q0za_: 3q0z A: [184133] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
Domain d3q0zb_: 3q0z B: [184134] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
Domain d3qgda_: 3qgd A: [184371] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
Domain d3qgdb_: 3qgd B: [184372] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
Domain d3qgea_: 3qge A: [248881] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 26f, so4 |
Domain d3qgeb_: 3qge B: [248882] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 26f, so4 |
Domain d3qgfa_: 3qgf A: [184373] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
Domain d3qgfb_: 3qgf B: [184374] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
Domain d3skab_: 3ska B: [216430] Other proteins in same PDB: d3skaa_ automated match to d3lkha_ protein/RNA complex; complexed with 053, po4 |
Domain d3skha_: 3skh A: [216431] automated match to d3lkha_ protein/RNA complex; complexed with 058 |
Domain d3skhb_: 3skh B: [216432] automated match to d3lkha_ protein/RNA complex; complexed with 058 |
Domain d3tyqa_: 3tyq A: [186013] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
Domain d3tyqb_: 3tyq B: [186014] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
Domain d3tyva_: 3tyv A: [186015] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
Domain d3tyvb_: 3tyv B: [186016] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
Domain d3u4oa_: 3u4o A: [186076] automated match to d1nb4a_ complexed with 08e, po4 |
Domain d3u4ob_: 3u4o B: [186077] automated match to d1nb4a_ complexed with 08e, po4 |
Domain d3u4ra_: 3u4r A: [186078] automated match to d1nb4a_ complexed with 08f |
Domain d3u4rb_: 3u4r B: [186079] automated match to d1nb4a_ complexed with 08f |
Domain d4drua_: 4dru A: [195587] automated match to d1nb4a_ complexed with 0ln, gol, so4 |
Domain d4drub_: 4dru B: [195588] automated match to d1nb4a_ complexed with 0ln, gol, so4 |
Domain d4eawa_: 4eaw A: [196703] automated match to d1nb4a_ complexed with 0nq, edo, peg, so4 |
Domain d4eawb_: 4eaw B: [201821] automated match to d4eawa_ complexed with 0nq, edo, peg, so4 |
Domain d4gmca_: 4gmc A: [221997] automated match to d3mwva_ complexed with 1bi, so4 |
Domain d4gmcb_: 4gmc B: [221998] automated match to d3mwva_ complexed with 1bi, so4 |
Domain d4ih5a1: 4ih5 A:2-562 [223170] Other proteins in same PDB: d4ih5a2, d4ih5b2 automated match to d3mf5a_ complexed with 12r |
Domain d4ih5b1: 4ih5 B:2-562 [223171] Other proteins in same PDB: d4ih5a2, d4ih5b2 automated match to d3mf5a_ complexed with 12r |
Domain d4ih6a1: 4ih6 A:2-562 [223172] Other proteins in same PDB: d4ih6a2, d4ih6b2 automated match to d3mf5a_ complexed with 1ep |
Domain d4ih6b1: 4ih6 B:2-562 [223173] Other proteins in same PDB: d4ih6a2, d4ih6b2 automated match to d3mf5a_ complexed with 1ep |
Domain d4ih7a1: 4ih7 A:2-562 [223174] Other proteins in same PDB: d4ih7a2, d4ih7b2 automated match to d3mf5a_ complexed with 1er, zn |
Domain d4ih7b1: 4ih7 B:2-562 [223175] Other proteins in same PDB: d4ih7a2, d4ih7b2 automated match to d3mf5a_ complexed with 1er, zn |
Domain d4iz0b_: 4iz0 B: [202683] automated match to d3mwva_ complexed with 2bi |
Domain d4j04a_: 4j04 A: [223496] automated match to d3mwva_ protein/RNA complex; complexed with 1jf, mn |
Domain d4j04b_: 4j04 B: [223497] automated match to d3mwva_ protein/RNA complex; complexed with 1jf, mn |
Domain d4j06a_: 4j06 A: [223498] automated match to d3mwva_ protein/RNA complex; complexed with 1jg |
Domain d4j06b_: 4j06 B: [223499] automated match to d3mwva_ protein/RNA complex; complexed with 1jg |
Domain d4j08a_: 4j08 A: [223500] automated match to d3mwva_ protein/RNA complex; complexed with 1jh |
Domain d4j08b_: 4j08 B: [223501] automated match to d3mwva_ protein/RNA complex; complexed with 1jh |
Domain d4j0aa_: 4j0a A: [223502] automated match to d3mwva_ protein/RNA complex; complexed with 1jl |
Domain d4j0ab_: 4j0a B: [223503] automated match to d3mwva_ protein/RNA complex; complexed with 1jl |
Domain d4jjsa_: 4jjs A: [223845] automated match to d3mwva_ complexed with 1m9, mg |
Domain d4jjsb_: 4jjs B: [223846] automated match to d3mwva_ complexed with 1m9, mg |
Domain d4jjua_: 4jju A: [202748] automated match to d3mwva_ complexed with 1mb, gol, mg |
Domain d4jtya_: 4jty A: [224025] automated match to d3mwva_ protein/RNA complex; complexed with 1nv, gol, mg |
Domain d4jtyb_: 4jty B: [224026] automated match to d3mwva_ protein/RNA complex; complexed with 1nv, gol, mg |
Domain d4jtza_: 4jtz A: [224027] automated match to d3mwva_ protein/RNA complex; complexed with 1nw, gol, mg |
Domain d4jtzb_: 4jtz B: [224028] automated match to d3mwva_ protein/RNA complex; complexed with 1nw, gol, mg |
Domain d4ju1a_: 4ju1 A: [224029] automated match to d3mwva_ protein/RNA complex; complexed with 1nz, gol, mg |
Domain d4ju1b_: 4ju1 B: [224030] automated match to d3mwva_ protein/RNA complex; complexed with 1nz, gol, mg |
Domain d4ju2a_: 4ju2 A: [224031] automated match to d3mwva_ protein/RNA complex; complexed with 1o0, gol, mg |
Domain d4ju2b_: 4ju2 B: [224032] automated match to d3mwva_ protein/RNA complex; complexed with 1o0, gol, mg |
Domain d4ju3a_: 4ju3 A: [229256] automated match to d3mwva_ protein/RNA complex; complexed with 1o1, mg |
Domain d4ju3b_: 4ju3 B: [229260] automated match to d3mwva_ protein/RNA complex; complexed with 1o1, mg |
Domain d4ju4a_: 4ju4 A: [229261] automated match to d3mwva_ protein/RNA complex; complexed with 1o3, mg |
Domain d4ju4b_: 4ju4 B: [229262] automated match to d3mwva_ protein/RNA complex; complexed with 1o3, mg |
Domain d4ju6a_: 4ju6 A: [229258] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju6b_: 4ju6 B: [229257] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju7a_: 4ju7 A: [229255] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju7b_: 4ju7 B: [229259] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4jvqa_: 4jvq A: [236552] automated match to d3mwva_ protein/RNA complex; complexed with 1ml, gol, mg |
Domain d4jvqb_: 4jvq B: [236553] automated match to d3mwva_ protein/RNA complex; complexed with 1ml, gol, mg |
Domain d4mk7a1: 4mk7 A:2-562 [228253] Other proteins in same PDB: d4mk7a2, d4mk7b2 automated match to d3mf5a_ complexed with 28o, dms, mg |
Domain d4mk7b1: 4mk7 B:2-562 [228252] Other proteins in same PDB: d4mk7a2, d4mk7b2 automated match to d3mf5a_ complexed with 28o, dms, mg |
Domain d4mk8a1: 4mk8 A:2-562 [228259] Other proteins in same PDB: d4mk8a2, d4mk8b2 automated match to d3mf5a_ complexed with 28q, dms, gol |
Domain d4mk8b1: 4mk8 B:2-562 [228261] Other proteins in same PDB: d4mk8a2, d4mk8b2 automated match to d3mf5a_ complexed with 28q, dms, gol |
Domain d4mk9a1: 4mk9 A:2-562 [228258] Other proteins in same PDB: d4mk9a2, d4mk9b2 automated match to d3mf5a_ complexed with 28r, gol |
Domain d4mk9b1: 4mk9 B:2-562 [228260] Other proteins in same PDB: d4mk9a2, d4mk9b2 automated match to d3mf5a_ complexed with 28r, gol |
Domain d4mkaa1: 4mka A:2-562 [228256] Other proteins in same PDB: d4mkaa2, d4mkab2 automated match to d3mf5a_ complexed with 2ay, dms, gol |
Domain d4mkab1: 4mka B:2-562 [228257] Other proteins in same PDB: d4mkaa2, d4mkab2 automated match to d3mf5a_ complexed with 2ay, dms, gol |
Domain d4mkba1: 4mkb A:2-562 [228254] Other proteins in same PDB: d4mkba2, d4mkbb2 automated match to d3mf5a_ complexed with 28v |
Domain d4mkbb1: 4mkb B:2-562 [228255] Other proteins in same PDB: d4mkba2, d4mkbb2 automated match to d3mf5a_ complexed with 28v |
Hepatitis C virus [TaxId:420174] [188905] (22 PDB entries) |
Domain d3gnva_: 3gnv A: [176783] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
Domain d3gnvb_: 3gnv B: [176784] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
Domain d3gnwa_: 3gnw A: [176785] Other proteins in same PDB: d3gnwb2 automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
Domain d3gnwb1: 3gnw B:1-570 [176786] Other proteins in same PDB: d3gnwb2 automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
Domain d3gola_: 3gol A: [176789] automated match to d1nb4a_ complexed with mg, xnd |
Domain d3golb_: 3gol B: [176790] automated match to d1nb4a_ complexed with mg, xnd |
Domain d3skea_: 3ske A: [196188] automated match to d3gnwb_ protein/RNA complex; complexed with 054, po4 |
Domain d3skeb_: 3ske B: [196187] automated match to d3gnwb_ protein/RNA complex; complexed with 054, po4 |
Domain d4iz0a_: 4iz0 A: [196971] automated match to d3gnwb_ complexed with 2bi |
Domain d4j02a_: 4j02 A: [223492] automated match to d3mwva_ protein/RNA complex; complexed with 1je, na, so4 |
Domain d4j02b_: 4j02 B: [223493] automated match to d3mwva_ protein/RNA complex; complexed with 1je, na, so4 |
Domain d4jjub_: 4jju B: [197324] automated match to d3gnwb_ complexed with 1mb, gol, mg |
Domain d4jtwa_: 4jtw A: [253046] automated match to d3gnwb_ protein/RNA complex; complexed with 1nu, gol, mg |
Domain d4jtwb_: 4jtw B: [253047] automated match to d3gnwb_ protein/RNA complex; complexed with 1nu, gol, mg |
Domain d4jy0a_: 4jy0 A: [256822] automated match to d3gnwb_ complexed with 1o9 |
Domain d4jy0b_: 4jy0 B: [262783] automated match to d3gnwb_ complexed with 1o9 |
Domain d4jy1a_: 4jy1 A: [266486] automated match to d3gnwb_ complexed with nn3 |
Domain d4jy1b_: 4jy1 B: [266487] automated match to d3gnwb_ complexed with nn3 |
Domain d4kaia_: 4kai A: [197204] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv |
Domain d4kaib_: 4kai B: [197111] automated match to d3gnwb_ protein/RNA complex; complexed with 1pv |
Domain d4kb7a_: 4kb7 A: [224248] automated match to d4kbia_ protein/RNA complex; complexed with 690 |
Domain d4kb7b_: 4kb7 B: [224249] automated match to d4kbia_ protein/RNA complex; complexed with 690 |
Domain d4kbia_: 4kbi A: [197112] automated match to d3gnwb_ protein/RNA complex; complexed with 1c0 |
Domain d4kbib_: 4kbi B: [197205] automated match to d3gnwb_ protein/RNA complex; complexed with 1c0 |
Domain d4ke5a_: 4ke5 A: [224265] automated match to d4kbia_ protein/RNA complex; complexed with 1pv |
Domain d4ke5b_: 4ke5 B: [224266] automated match to d4kbia_ protein/RNA complex; complexed with 1pv |
Domain d4miaa1: 4mia A:2-562 [263017] Other proteins in same PDB: d4miaa2, d4miab2 automated match to d3gnwb_ complexed with 28l, zn |
Domain d4miab1: 4mia B:2-562 [257080] Other proteins in same PDB: d4miaa2, d4miab2 automated match to d3gnwb_ complexed with 28l, zn |
Domain d4miba1: 4mib A:2-562 [266735] Other proteins in same PDB: d4miba2, d4mibb2 automated match to d3gnwb_ complexed with 28m, dms |
Domain d4mibb1: 4mib B:2-562 [266736] Other proteins in same PDB: d4miba2, d4mibb2 automated match to d3gnwb_ complexed with 28m, dms |
Domain d4mz4a_: 4mz4 A: [229706] automated match to d3upha_ protein/RNA complex; complexed with 2f3, po4 |
Domain d4mz4b_: 4mz4 B: [229710] automated match to d3upha_ protein/RNA complex; complexed with 2f3, po4 |
Domain d4oowa_: 4oow A: [261849] automated match to d3gnwb_ complexed with caq |
Domain d4oowb_: 4oow B: [261850] automated match to d3gnwb_ complexed with caq |
Domain d4ry4a_: 4ry4 A: [309606] automated match to d3gnwb_ mutant |
Domain d4ry4b_: 4ry4 B: [309607] automated match to d3gnwb_ mutant |
Domain d4ry5a_: 4ry5 A: [309608] automated match to d3gnwb_ complexed with mn, utp; mutant |
Domain d4ry5b_: 4ry5 B: [309609] automated match to d3gnwb_ complexed with mn, utp; mutant |
Domain d4ry6a_: 4ry6 A: [309610] automated match to d3gnwb_ mutant |
Domain d4ry6b_: 4ry6 B: [309611] automated match to d3gnwb_ mutant |
Domain d4ry7a_: 4ry7 A: [309612] automated match to d3gnwb_ mutant |
Domain d4ry7b_: 4ry7 B: [309613] automated match to d3gnwb_ mutant |
Human poliovirus 1 [TaxId:12081] [256393] (8 PDB entries) |
Domain d2ijfa_: 2ijf A: [242161] automated match to d4k4za_ mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d2ilya_: 2ily A: [137500] automated match to d1ra6a_ complexed with acy, atp, na missing some secondary structures that made up less than one-third of the common domain |
Domain d2ilza_: 2ilz A: [137501] automated match to d1ra6a_ complexed with acy, gtp, mn, na missing some secondary structures that made up less than one-third of the common domain |
Domain d2im0a_: 2im0 A: [137502] automated match to d1ra6a_ complexed with acy, ctp, na missing some secondary structures that made up less than one-third of the common domain |
Domain d2im1a_: 2im1 A: [137503] automated match to d1ra6a_ complexed with acy, ctp, mn, na missing some secondary structures that made up less than one-third of the common domain |
Domain d2im2a_: 2im2 A: [137504] automated match to d1ra6a_ complexed with acy, na, utp missing some secondary structures that made up less than one-third of the common domain |
Domain d2im3a_: 2im3 A: [137505] automated match to d1ra6a_ complexed with acy, mn, na, utp missing some secondary structures that made up less than one-third of the common domain |
Domain d4r0ea_: 4r0e A: [260952] automated match to d4k4za_ mutant missing some secondary structures that made up less than one-third of the common domain |
Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (2 PDB entries) Uniprot P03303 1720-2179 |
Domain d1teba_: 1teb A: [303086] automated match to d1xr5a_ complexed with sm missing some secondary structures that made up less than one-third of the common domain |
Domain d1xr5a_: 1xr5 A: [115864] complexed with sm missing some secondary structures that made up less than one-third of the common domain |
Human rhinovirus 16 [TaxId:31708] [188024] (2 PDB entries) |
Domain d1tp7a_: 1tp7 A: [161779] automated match to d1xr6a_ complexed with dmx, so4 |
Domain d1tp7b_: 1tp7 B: [161780] automated match to d1xr6a_ complexed with dmx, so4 |
Domain d1tp7c_: 1tp7 C: [161781] automated match to d1xr6a_ complexed with dmx, so4 |
Domain d1tp7d_: 1tp7 D: [161782] automated match to d1xr6a_ complexed with dmx, so4 |
Domain d4k50a_: 4k50 A: [202832] Other proteins in same PDB: d4k50i_ automated match to d1tp7a_ protein/RNA complex; complexed with act, gol, so4 |
Domain d4k50e_: 4k50 E: [202833] Other proteins in same PDB: d4k50i_ automated match to d1tp7a_ protein/RNA complex; complexed with act, gol, so4 |
Domain d4k50m_: 4k50 M: [202834] Other proteins in same PDB: d4k50i_ automated match to d1tp7a_ protein/RNA complex; complexed with act, gol, so4 |
Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (2 PDB entries) Uniprot Q82122 1694-2153 |
Domain d1te9a_: 1te9 A: [303082] automated match to d1xr7a_ |
Domain d1te9b_: 1te9 B: [303083] automated match to d1xr7a_ |
Domain d1xr7a_: 1xr7 A: [115866] |
Domain d1xr7b_: 1xr7 B: [115867] |
Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (2 PDB entries) Uniprot P12916 1698-2157 |
Domain d1te8a_: 1te8 A: [303081] automated match to d1xr6a_ complexed with k missing some secondary structures that made up less than one-third of the common domain |
Domain d1xr6a_: 1xr6 A: [115865] complexed with k missing some secondary structures that made up less than one-third of the common domain |
Norwalk virus [TaxId:11983] [103400] (8 PDB entries) |
Domain d1sh0a_: 1sh0 A: [98876] missing some secondary structures that made up less than one-third of the common domain |
Domain d1sh0b_: 1sh0 B: [98877] missing some secondary structures that made up less than one-third of the common domain |
Domain d1sh2a_: 1sh2 A: [98878] missing some secondary structures that made up less than one-third of the common domain |
Domain d1sh3a_: 1sh3 A: [98879] complexed with mg missing some secondary structures that made up less than one-third of the common domain |
Domain d1sh3b_: 1sh3 B: [98880] complexed with mg missing some secondary structures that made up less than one-third of the common domain |
Domain d3bsna_: 3bsn A: [172811] automated match to d1sh0b_ protein/RNA complex; complexed with gol, mn, n5c missing some secondary structures that made up less than one-third of the common domain |
Domain d3bsoa_: 3bso A: [172812] automated match to d1sh0b_ protein/RNA complex; complexed with ctp, gol, mn missing some secondary structures that made up less than one-third of the common domain |
Domain d3h5xa_: 3h5x A: [177205] automated match to d1sh0b_ protein/RNA complex; complexed with csg, gol, mn missing some secondary structures that made up less than one-third of the common domain |
Domain d3h5ya_: 3h5y A: [177206] automated match to d1sh0b_ protein/RNA complex; complexed with ctp, gol, mn missing some secondary structures that made up less than one-third of the common domain |
Domain d4qpxa_: 4qpx A: [271693] automated match to d1sh0b_ protein/RNA complex; complexed with gol, mn missing some secondary structures that made up less than one-third of the common domain |
Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (12 PDB entries) Uniprot P03300 1748-2208 |
Domain d1ra6a_: 1ra6 A: [104879] complexed with acy missing some secondary structures that made up less than one-third of the common domain |
Domain d1ra7a_: 1ra7 A: [104880] complexed with acy, gtp missing some secondary structures that made up less than one-third of the common domain |
Domain d1raja_: 1raj A: [104881] fragment; missing more than one-third of the common structure and/or sequence missing some secondary structures that made up less than one-third of the common domain |
Domain d1rdra_: 1rdr A: [43116] complexed with ca fragment; missing more than one-third of the common structure and/or sequence missing some secondary structures that made up less than one-third of the common domain |
Domain d1tqla_: 1tql A: [107235] complexed with acy; mutant missing some secondary structures that made up less than one-third of the common domain |
Domain d2ijd12: 2ijd 1:184-644 [137475] Other proteins in same PDB: d2ijd11, d2ijd21 automatically matched to d1ra6a_ complexed with so4, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d2ijd22: 2ijd 2:184-644 [137477] Other proteins in same PDB: d2ijd11, d2ijd21 automatically matched to d1ra6a_ complexed with so4, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol6a_: 3ol6 A: [183110] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol6e_: 3ol6 E: [183111] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol6i_: 3ol6 I: [183112] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol6m_: 3ol6 M: [183113] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol7a_: 3ol7 A: [183114] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol7e_: 3ol7 E: [183115] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol7i_: 3ol7 I: [183116] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol7m_: 3ol7 M: [183117] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol8a_: 3ol8 A: [183118] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol8e_: 3ol8 E: [183119] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol8i_: 3ol8 I: [183120] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol8m_: 3ol8 M: [183121] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol9a_: 3ol9 A: [183122] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol9e_: 3ol9 E: [183123] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol9i_: 3ol9 I: [183124] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3ol9m_: 3ol9 M: [183125] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olaa_: 3ola A: [183126] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olae_: 3ola E: [183127] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olai_: 3ola I: [183128] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olam_: 3ola M: [183129] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olba_: 3olb A: [183130] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olbe_: 3olb E: [183131] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olbi_: 3olb I: [183132] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Domain d3olbm_: 3olb M: [183133] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn missing some secondary structures that made up less than one-third of the common domain |
Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries) |
Domain d1khva_: 1khv A: [68627] protein/RNA complex; complexed with lu missing some secondary structures that made up less than one-third of the common domain |
Domain d1khvb_: 1khv B: [68628] protein/RNA complex; complexed with lu missing some secondary structures that made up less than one-third of the common domain |
Domain d1khwa_: 1khw A: [68629] protein/RNA complex; complexed with mn missing some secondary structures that made up less than one-third of the common domain |
Domain d1khwb_: 1khw B: [68630] protein/RNA complex; complexed with mn missing some secondary structures that made up less than one-third of the common domain |
Timeline for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase: