SCOPe 2.08: Superfamily d.110.3: PYP-like sensor domain (PAS domain)

Lineage for Superfamily d.110.3: PYP-like sensor domain (PAS domain)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families)
   alpha-beta(2)-alpha(2)-beta(3)

Families:

1. d.110.3.1: PYP-like [55786] (3 proteins)

2. d.110.3.2: Heme-binding PAS domain [55789] (3 proteins)

3. d.110.3.5: N-terminal PAS domain of Pas kinase [82764] (1 protein)
   automatically mapped to Pfam PF00989
   automatically mapped to Pfam PF13426

4. d.110.3.6: Flavin-binding PAS domain [88853] (4 proteins)
   contains PAC motif

5. d.110.3.7: Hypoxia-inducible factor Hif2a, C-terminal domain [103184] (2 proteins)
   contains PAC motif

6. d.110.3.8: PAS domain of steroid receptor coactivator 1A, NCo-A1 [103187] (2 proteins)

7. d.110.3.9: BphP N-terminal domain-like [160669] (3 proteins)
   Pfam PF08446; PAS_2

8. d.110.3.0: automated matches [191387] (1 protein)
   not a true family

More info for Superfamily d.110.3: PYP-like sensor domain (PAS domain)

Timeline for Superfamily d.110.3: PYP-like sensor domain (PAS domain):

• Superfamily d.110.3: PYP-like sensor domain (PAS domain) first appeared (with stable ids) in SCOP 1.55, called Superfamily d.110.3: PYP-like sensor domain
  
• Superfamily d.110.3: PYP-like sensor domain (PAS domain) appears in SCOPe 2.07