Lineage for Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2139769Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214
  4. 2139770Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families) (S)
  5. 2139771Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 protein domains)

Protein Domains:

  1. 21397721-aminocyclopropane-1-carboxylate deaminase [53694] (3 species)
    1. 2139773Species Pseudomonas sp., strain ACP [TaxId:306] [110722] (6 PDB entries)
      Uniprot Q00740
    2. 2139798Species Pyrococcus horikoshii [TaxId:53953] [89777] (2 PDB entries)
    3. 2139826Species Yeast (Hansenula saturnus) [TaxId:4906] [53695] (4 PDB entries)
  2. 2139843Cystathionine beta-synthase [64174] (1 species)
    PLP-dependent hemoprotein
  3. 2139857Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) [142749] (1 species)
  4. 2139860L-serine dehydratase [102668] (2 species)
    1. 2139861Species Human (Homo sapiens) [TaxId:9606] [110721] (1 PDB entry)
      Uniprot P20132
    2. 2139863Species Norway rat (Rattus norvegicus) [TaxId:10116] [102669] (2 PDB entries)
  5. 2139874O-acetylserine sulfhydrylase (Cysteine synthase) [53690] (7 species)
    1. 2139875Species Aeropyrum pernix [TaxId:56636] [142742] (3 PDB entries)
      Uniprot Q9YBL2 1-382
    2. 2139878Species Escherichia coli, isoform B (CysM) [TaxId:562] [142744] (2 PDB entries)
      Uniprot P16703 2-293
    3. 2139881Species Haemophilus influenzae [TaxId:727] [142746] (3 PDB entries)
      Uniprot P45040 2-311
    4. 2139885Species Salmonella typhimurium [TaxId:90371] [53691] (3 PDB entries)
    5. 2139894Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [142745] (2 PDB entries)
      Uniprot P47998 3-322
    6. 2139897Species Thermotoga maritima [TaxId:2336] [75312] (2 PDB entries)
      TM0665
    7. 2139906Species Thermus thermophilus [TaxId:274] [142743] (1 PDB entry)
      Uniprot Q5SLE6 1-302
  6. 2139908Threonine deaminase [53692] (2 species)
    1. 2139909Species Escherichia coli [TaxId:562] [53693] (1 PDB entry)
    2. 2139911Species Thermus thermophilus [TaxId:274] [142747] (1 PDB entry)
      Uniprot Q5SLL4 2-311
  7. 2139913Threonine synthase [64172] (4 species)
    1. 2139914Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [75313] (1 PDB entry)
    2. 2139917Species Escherichia coli [TaxId:562] [142748] (1 PDB entry)
      Uniprot P00934 1-428
    3. 2139919Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [64173] (3 PDB entries)
    4. 2139930Species Thermus thermophilus [TaxId:274] [102667] (6 PDB entries)
  8. 2139947Tryptophan synthase, beta-subunit [53688] (4 species)
    1. 2139948Species Mycobacterium tuberculosis [TaxId:1773] [267796] (2 PDB entries)
    2. 2139953Species Pyrococcus furiosus [TaxId:2261] [142741] (2 PDB entries)
      Uniprot Q8U093 1-386
    3. 2139964Species Salmonella enterica [TaxId:90371] [229810] (5 PDB entries)
    4. 2139970Species Salmonella typhimurium [TaxId:90371] [53689] (44 PDB entries)
  9. 2140010automated matches [190054] (13 species)
    not a true protein
    1. 2140011Species Aeropyrum pernix [TaxId:272557] [195353] (3 PDB entries)
    2. 2140018Species Escherichia coli [TaxId:562] [187621] (3 PDB entries)
    3. 2140022Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [188093] (3 PDB entries)
    4. 2140026Species Haemophilus influenzae [TaxId:727] [189119] (3 PDB entries)
    5. 2140030Species Human (Homo sapiens) [TaxId:9606] [256281] (1 PDB entry)
    6. 2140032Species Pyrococcus furiosus [TaxId:186497] [279274] (6 PDB entries)
    7. 2140047Species Salmonella typhimurium [TaxId:90371] [189633] (13 PDB entries)
    8. 2140068Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187877] (1 PDB entry)
    9. 2140070Species Thermus thermophilus HB8 [TaxId:300852] [187272] (5 PDB entries)
    10. 2140080Species Thermus thermophilus [TaxId:274] [188788] (1 PDB entry)
    11. 2276758Species Escherichia coli [TaxId:83334] [320059] (2 PDB entries)
    12. 2277862Species Francisella tularensis [TaxId:177416] [321163] (1 PDB entry)
    13. 2284179Species Pyrococcus furiosus [TaxId:2261] [327480] (1 PDB entry)

More info for Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes

Timeline for Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes: