Lineage for Species: Pyrococcus furiosus [TaxId: 186497]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2139769Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214
  4. 2139770Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families) (S)
  5. 2139771Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 protein domains)
  6. 2140010Protein automated matches [190054] (13 species)
    not a true protein
  7. 2140032Species Pyrococcus furiosus [TaxId:186497] [279274] (6 PDB entries)

PDB entries in Species: Pyrococcus furiosus [TaxId: 186497]:

  1. Domain(s) for 5dvz:
    1. 2270208Domain d5dvzd_: 5dvz D: [313513]
      automated match to d5dw0a_
      complexed with na, po4
    2. 2270277Domain d5dvzc_: 5dvz C: [313582]
      automated match to d5dw0a_
      complexed with na, po4
    3. 2270485Domain d5dvza_: 5dvz A: [313790]
      automated match to d5dw0a_
      complexed with na, po4
    4. 2270491Domain d5dvzb_: 5dvz B: [313796]
      automated match to d5dw0a_
      complexed with na, po4
  2. Domain(s) for 5dw0:
    1. 2140037Domain d5dw0a_: 5dw0 A: [279280]
      automated match to d1v8zb_
      complexed with na, pls
    2. 2140038Domain d5dw0b_: 5dw0 B: [279278]
      automated match to d1v8zb_
      complexed with na, pls
    3. 2140039Domain d5dw0c_: 5dw0 C: [279281]
      automated match to d1v8zb_
      complexed with na, pls
    4. 2140040Domain d5dw0d_: 5dw0 D: [279282]
      automated match to d1v8zb_
      complexed with na, pls
  3. Domain(s) for 5dw3:
    1. 2140033Domain d5dw3a_: 5dw3 A: [279275]
      automated match to d1v8zb_
      complexed with na, po4, trp
    2. 2140034Domain d5dw3b_: 5dw3 B: [279279]
      automated match to d1v8zb_
      complexed with na, po4, trp
    3. 2140035Domain d5dw3c_: 5dw3 C: [279276]
      automated match to d1v8zb_
      complexed with na, po4, trp
    4. 2140036Domain d5dw3d_: 5dw3 D: [279277]
      automated match to d1v8zb_
      complexed with na, po4, trp
  4. Domain(s) for 5e0k:
    1. 2140041Domain d5e0kb_: 5e0k B: [279283]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    2. 2140042Domain d5e0kd_: 5e0k D: [279284]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    3. 2140043Domain d5e0kf_: 5e0k F: [279287]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    4. 2140044Domain d5e0kh_: 5e0k H: [279290]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    5. 2140045Domain d5e0kj_: 5e0k J: [279292]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    6. 2140046Domain d5e0kl_: 5e0k L: [279291]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
  5. Domain(s) for 5ixj:
    1. 2278024Domain d5ixjb1: 5ixj B:1-388 [321325]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    2. 2278048Domain d5ixjc_: 5ixj C: [321349]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    3. 2278121Domain d5ixjd1: 5ixj D:1-388 [321422]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    4. 2278209Domain d5ixja_: 5ixj A: [321510]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
  6. Domain(s) for 5vm5:
    1. 2291384Domain d5vm5b_: 5vm5 B: [334685]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    2. 2291403Domain d5vm5c_: 5vm5 C: [334704]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    3. 2291418Domain d5vm5a_: 5vm5 A: [334719]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    4. 2291513Domain d5vm5d_: 5vm5 D: [334814]
      automated match to d5dw0a_
      complexed with 0jo, na, pls

More info for Species Pyrococcus furiosus [TaxId:186497] from c.79.1.1 automated matches

Timeline for Species Pyrococcus furiosus [TaxId:186497] from c.79.1.1 automated matches: