Lineage for Species: Pyrococcus furiosus [TaxId: 186497]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214
  4. Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families) (S)
  5. Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 proteins)
  6. Protein automated matches [190054] (13 species)
    not a true protein
  7. Species Pyrococcus furiosus [TaxId:186497] [279274] (15 PDB entries)

PDB entries in Species: Pyrococcus furiosus [TaxId: 186497]:

  1. Domain(s) for 5dvz:
    1. Domain d5dvza_: 5dvz A: [313790]
      automated match to d5dw0a_
      complexed with na, po4
    2. Domain d5dvzb_: 5dvz B: [313796]
      automated match to d5dw0a_
      complexed with na, po4
    3. Domain d5dvzc_: 5dvz C: [313582]
      automated match to d5dw0a_
      complexed with na, po4
    4. Domain d5dvzd_: 5dvz D: [313513]
      automated match to d5dw0a_
      complexed with na, po4
  2. Domain(s) for 5dw0:
    1. Domain d5dw0a_: 5dw0 A: [279280]
      automated match to d1v8zb_
      complexed with na, pls
    2. Domain d5dw0b_: 5dw0 B: [279278]
      automated match to d1v8zb_
      complexed with na, pls
    3. Domain d5dw0c_: 5dw0 C: [279281]
      automated match to d1v8zb_
      complexed with na, pls
    4. Domain d5dw0d_: 5dw0 D: [279282]
      automated match to d1v8zb_
      complexed with na, pls
  3. Domain(s) for 5dw3:
    1. Domain d5dw3a_: 5dw3 A: [279275]
      automated match to d1v8zb_
      complexed with na, po4, trp
    2. Domain d5dw3b_: 5dw3 B: [279279]
      automated match to d1v8zb_
      complexed with na, po4, trp
    3. Domain d5dw3c_: 5dw3 C: [279276]
      automated match to d1v8zb_
      complexed with na, po4, trp
    4. Domain d5dw3d_: 5dw3 D: [279277]
      automated match to d1v8zb_
      complexed with na, po4, trp
  4. Domain(s) for 5e0k:
    1. Domain d5e0kb_: 5e0k B: [279283]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    2. Domain d5e0kd_: 5e0k D: [279284]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    3. Domain d5e0kf_: 5e0k F: [279287]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    4. Domain d5e0kh_: 5e0k H: [279290]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    5. Domain d5e0kj_: 5e0k J: [279292]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
    6. Domain d5e0kl_: 5e0k L: [279291]
      Other proteins in same PDB: d5e0ka_, d5e0kc_, d5e0ke_, d5e0kg_, d5e0ki_, d5e0kk_
      automated match to d1v8zb_
      complexed with po4
  5. Domain(s) for 5ixj:
    1. Domain d5ixja_: 5ixj A: [321510]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    2. Domain d5ixjb1: 5ixj B:1-388 [321325]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    3. Domain d5ixjc_: 5ixj C: [321349]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
    4. Domain d5ixjd1: 5ixj D:1-388 [321422]
      Other proteins in same PDB: d5ixjb2, d5ixjd2
      automated match to d1v8zb_
      complexed with na, thr
  6. Domain(s) for 5vm5:
    1. Domain d5vm5a_: 5vm5 A: [334719]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    2. Domain d5vm5b_: 5vm5 B: [334685]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    3. Domain d5vm5c_: 5vm5 C: [334704]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
    4. Domain d5vm5d_: 5vm5 D: [334814]
      automated match to d5dw0a_
      complexed with 0jo, na, pls
  7. Domain(s) for 6am7:
    1. Domain d6am7a_: 6am7 A: [352128]
      automated match to d1v8zb_
      complexed with na, po4
    2. Domain d6am7b_: 6am7 B: [352068]
      automated match to d1v8zb_
      complexed with na, po4
    3. Domain d6am7c_: 6am7 C: [352350]
      automated match to d1v8zb_
      complexed with na, po4
    4. Domain d6am7d_: 6am7 D: [352131]
      automated match to d1v8zb_
      complexed with na, po4
  8. Domain(s) for 6am8:
    1. Domain d6am8a_: 6am8 A: [352100]
      automated match to d1v8zb_
      complexed with na, plt, trp
    2. Domain d6am8b_: 6am8 B: [352101]
      automated match to d1v8zb_
      complexed with na, plt, trp
    3. Domain d6am8c_: 6am8 C: [352031]
      automated match to d1v8zb_
      complexed with na, plt, trp
    4. Domain d6am8d_: 6am8 D: [352032]
      automated match to d1v8zb_
      complexed with na, plt, trp
  9. Domain(s) for 6am9:
    1. Domain d6am9a_: 6am9 A: [352166]
      automated match to d1v8zb_
      complexed with 0jo, na, pls
    2. Domain d6am9b_: 6am9 B: [352227]
      automated match to d1v8zb_
      complexed with 0jo, na, pls
    3. Domain d6am9c_: 6am9 C: [352327]
      automated match to d1v8zb_
      complexed with 0jo, na, pls
    4. Domain d6am9d_: 6am9 D: [352310]
      automated match to d1v8zb_
      complexed with 0jo, na, pls
  10. Domain(s) for 6amc:
    1. Domain d6amca_: 6amc A: [352168]
      Other proteins in same PDB: d6amcb2
      automated match to d1v8zb_
      complexed with na
    2. Domain d6amcb1: 6amc B:1-388 [352033]
      Other proteins in same PDB: d6amcb2
      automated match to d1v8zb_
      complexed with na
    3. Domain d6amcc_: 6amc C: [352029]
      Other proteins in same PDB: d6amcb2
      automated match to d1v8zb_
      complexed with na
    4. Domain d6amcd_: 6amc D: [352345]
      Other proteins in same PDB: d6amcb2
      automated match to d1v8zb_
      complexed with na
  11. Domain(s) for 6amh:
    1. Domain d6amha_: 6amh A: [352331]
      Other proteins in same PDB: d6amhb2
      automated match to d1v8zb_
      complexed with na, pls
    2. Domain d6amhb1: 6amh B:1-388 [352213]
      Other proteins in same PDB: d6amhb2
      automated match to d1v8zb_
      complexed with na, pls
    3. Domain d6amhc_: 6amh C: [352030]
      Other proteins in same PDB: d6amhb2
      automated match to d1v8zb_
      complexed with na, pls
    4. Domain d6amhd_: 6amh D: [352336]
      Other proteins in same PDB: d6amhb2
      automated match to d1v8zb_
      complexed with na, pls
  12. Domain(s) for 6ami:
    1. Domain d6amia_: 6ami A: [352340]
      automated match to d1v8zb_
      complexed with llp, na, trp
    2. Domain d6amib_: 6ami B: [352288]
      automated match to d1v8zb_
      complexed with llp, na, trp
    3. Domain d6amic_: 6ami C: [352349]
      automated match to d1v8zb_
      complexed with llp, na, trp
    4. Domain d6amid_: 6ami D: [352341]
      automated match to d1v8zb_
      complexed with llp, na, trp
  13. Domain(s) for 6cut:
    1. Domain d6cuta_: 6cut A: [358007]
      automated match to d1v8zb_
      complexed with fej, na
    2. Domain d6cutb_: 6cut B: [357991]
      automated match to d1v8zb_
      complexed with fej, na
    3. Domain d6cutc_: 6cut C: [358086]
      automated match to d1v8zb_
      complexed with fej, na
    4. Domain d6cutd_: 6cut D: [357978]
      automated match to d1v8zb_
      complexed with fej, na
  14. Domain(s) for 6cuv:
    1. Domain d6cuva_: 6cuv A: [358050]
      automated match to d1v8zb_
      complexed with na, po4
    2. Domain d6cuvb_: 6cuv B: [358077]
      automated match to d1v8zb_
      complexed with na, po4
    3. Domain d6cuvc_: 6cuv C: [357963]
      automated match to d1v8zb_
      complexed with na, po4
    4. Domain d6cuvd_: 6cuv D: [357964]
      automated match to d1v8zb_
      complexed with na, po4
  15. Domain(s) for 6cuz:
    1. Domain d6cuza_: 6cuz A: [358015]
      automated match to d1v8zb_
      complexed with fev, na, po4
    2. Domain d6cuzb_: 6cuz B: [357985]
      automated match to d1v8zb_
      complexed with fev, na, po4
    3. Domain d6cuzc_: 6cuz C: [358006]
      automated match to d1v8zb_
      complexed with fev, na, po4
    4. Domain d6cuzd_: 6cuz D: [358005]
      automated match to d1v8zb_
      complexed with fev, na, po4

More info for Species Pyrococcus furiosus [TaxId:186497] from c.79.1.1 automated matches

Timeline for Species Pyrococcus furiosus [TaxId:186497] from c.79.1.1 automated matches: