SCOPe 2.08: Family c.51.1.1: Anticodon-binding domain of Class II aaRS

Lineage for Family c.51.1.1: Anticodon-binding domain of Class II aaRS

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest

4. Superfamily c.51.1: Class II aaRS ABD-related [52954] (3 families)

5. Family c.51.1.1: Anticodon-binding domain of Class II aaRS [52955] (6 proteins)

Proteins:

1. Glycyl-tRNA synthetase (GlyRS), C-terminal domain [52960] (1 species)

   • Species Thermus thermophilus [TaxId:274] [52961] (3 PDB entries)

2. Histidyl-tRNA synthetase (HisRS), C-terminal domain [52956] (4 species)

   1. Species Escherichia coli [TaxId:562] [52957] (4 PDB entries)

   2. Species Staphylococcus aureus [TaxId:1280] [52958] (1 PDB entry)

   3. Species Thermoplasma acidophilum [TaxId:2303] [142418] (1 PDB entry)
      Uniprot Q9HLX5 330-426

   4. Species Thermus thermophilus [TaxId:274] [52959] (3 PDB entries)

3. Nuclear receptor coactivator 5 (KIAA1637) [110619] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [110620] (1 PDB entry)
     Uniprot Q9HCD5 197-313

4. Prolyl-tRNA synthetase (ProRS) domain [64071] (3 species)

   1. Species Methanocaldococcus jannaschii [TaxId:2190] [89715] (1 PDB entry)

   2. Species Methanothermobacter thermautotrophicus [TaxId:145262] [89714] (4 PDB entries)

   3. Species Thermus thermophilus [TaxId:274] [64072] (4 PDB entries)

5. The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain [64073] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [142419] (2 PDB entries)
      Uniprot Q9UHN1 369-485

   2. Species Mouse (Mus musculus) [TaxId:10090] [64074] (2 PDB entries)

6. Threonyl-tRNA synthetase (ThrRS), C-terminal domain [52962] (2 species)

   1. Species Escherichia coli [TaxId:562] [52963] (5 PDB entries)

   2. Species Staphylococcus aureus [TaxId:1280] [102469] (2 PDB entries)

More info for Family c.51.1.1: Anticodon-binding domain of Class II aaRS

Timeline for Family c.51.1.1: Anticodon-binding domain of Class II aaRS:

• Family c.51.1.1: Anticodon-binding domain of Class II aaRS first appeared (with stable ids) in SCOP 1.55
  
• Family c.51.1.1: Anticodon-binding domain of Class II aaRS appears in SCOPe 2.07