SCOPe 2.08: Protein: Histidyl-tRNA synthetase (HisRS), C-terminal domain

Lineage for Protein: Histidyl-tRNA synthetase (HisRS), C-terminal domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
Superfamily c.51.1: Class II aaRS ABD-related [52954] (3 families)
Family c.51.1.1: Anticodon-binding domain of Class II aaRS [52955] (6 proteins)
Protein Histidyl-tRNA synthetase (HisRS), C-terminal domain [52956] (4 species)

Species:

Escherichia coli [TaxId:562] [52957] (4 PDB entries)
1. Domains for 1htt:
  1. Domain d1htta1: 1htt A:326-424 [33178]
    Other proteins in same PDB: d1htta2, d1httb2, d1httc2, d1httd2
    protein/RNA complex; complexed with amp, his
  2. Domain d1httb1: 1htt B:326-424 [33179]
    Other proteins in same PDB: d1htta2, d1httb2, d1httc2, d1httd2
    protein/RNA complex; complexed with amp, his
  3. Domain d1httc1: 1htt C:326-424 [33180]
    Other proteins in same PDB: d1htta2, d1httb2, d1httc2, d1httd2
    protein/RNA complex; complexed with amp, his
  4. Domain d1httd1: 1htt D:326-424 [33181]
    Other proteins in same PDB: d1htta2, d1httb2, d1httc2, d1httd2
    protein/RNA complex; complexed with amp, his
2. Domains for 1kmm:
  1. Domain d1kmma1: 1kmm A:326-424 [33174]
    Other proteins in same PDB: d1kmma2, d1kmmb2, d1kmmc2, d1kmmd2
    protein/RNA complex; complexed with ham
  2. Domain d1kmmb1: 1kmm B:326-424 [33175]
    Other proteins in same PDB: d1kmma2, d1kmmb2, d1kmmc2, d1kmmd2
    protein/RNA complex; complexed with ham
  3. Domain d1kmmc1: 1kmm C:326-424 [33176]
    Other proteins in same PDB: d1kmma2, d1kmmb2, d1kmmc2, d1kmmd2
    protein/RNA complex; complexed with ham
  4. Domain d1kmmd1: 1kmm D:326-424 [33177]
    Other proteins in same PDB: d1kmma2, d1kmmb2, d1kmmc2, d1kmmd2
    protein/RNA complex; complexed with ham
3. Domains for 1kmn:
  1. Domain d1kmna1: 1kmn A:326-424 [33182]
    Other proteins in same PDB: d1kmna2, d1kmnb2, d1kmnc2, d1kmnd2
    protein/RNA complex; complexed with atp, hso
  2. Domain d1kmnb1: 1kmn B:326-424 [33183]
    Other proteins in same PDB: d1kmna2, d1kmnb2, d1kmnc2, d1kmnd2
    protein/RNA complex; complexed with atp, hso
  3. Domain d1kmnc1: 1kmn C:326-424 [33184]
    Other proteins in same PDB: d1kmna2, d1kmnb2, d1kmnc2, d1kmnd2
    protein/RNA complex; complexed with atp, hso
  4. Domain d1kmnd1: 1kmn D:326-424 [33185]
    Other proteins in same PDB: d1kmna2, d1kmnb2, d1kmnc2, d1kmnd2
    protein/RNA complex; complexed with atp, hso
4. Domains for 2el9:
  1. Domain d2el9a1: 2el9 A:326-424 [146887]
    Other proteins in same PDB: d2el9a2, d2el9b2, d2el9c2, d2el9d2
    automated match to d1kmma1
    protein/RNA complex; complexed with hss
  2. Domain d2el9b1: 2el9 B:326-424 [146889]
    Other proteins in same PDB: d2el9a2, d2el9b2, d2el9c2, d2el9d2
    automated match to d1kmma1
    protein/RNA complex; complexed with hss
  3. Domain d2el9c1: 2el9 C:326-424 [146891]
    Other proteins in same PDB: d2el9a2, d2el9b2, d2el9c2, d2el9d2
    automated match to d1kmma1
    protein/RNA complex; complexed with hss
  4. Domain d2el9d1: 2el9 D:326-424 [146893]
    Other proteins in same PDB: d2el9a2, d2el9b2, d2el9c2, d2el9d2
    automated match to d1kmma1
    protein/RNA complex; complexed with hss
Staphylococcus aureus [TaxId:1280] [52958] (1 PDB entry)
- Domains for 1qe0:
  1. Domain d1qe0a1: 1qe0 A:326-420 [33186]
    Other proteins in same PDB: d1qe0a2, d1qe0b2
  2. Domain d1qe0b1: 1qe0 B:326-419 [33187]
    Other proteins in same PDB: d1qe0a2, d1qe0b2
Thermoplasma acidophilum [TaxId:2303] [142418] (1 PDB entry)
Uniprot Q9HLX5 330-426
- Domains for 1wu7:
  1. Domain d1wu7a1: 1wu7 A:330-426 [121275]
    Other proteins in same PDB: d1wu7a2, d1wu7b2
  2. Domain d1wu7b1: 1wu7 B:330-424 [121277]
    Other proteins in same PDB: d1wu7a2, d1wu7b2
    automated match to d1wu7a1
Thermus thermophilus [TaxId:274] [52959] (3 PDB entries)
1. Domains for 1adj:
  1. Domain d1adja1: 1adj A:326-421 [33188]
    Other proteins in same PDB: d1adja2, d1adjb2, d1adjc2, d1adjd2
    protein/RNA complex; complexed with his, so4
  2. Domain d1adjb1: 1adj B:326-421 [33189]
    Other proteins in same PDB: d1adja2, d1adjb2, d1adjc2, d1adjd2
    protein/RNA complex; complexed with his, so4
  3. Domain d1adjc1: 1adj C:326-421 [33190]
    Other proteins in same PDB: d1adja2, d1adjb2, d1adjc2, d1adjd2
    protein/RNA complex; complexed with his, so4
  4. Domain d1adjd1: 1adj D:326-421 [33191]
    Other proteins in same PDB: d1adja2, d1adjb2, d1adjc2, d1adjd2
    protein/RNA complex; complexed with his, so4
2. Domains for 1ady:
  1. Domain d1adya1: 1ady A:326-421 [33192]
    Other proteins in same PDB: d1adya2, d1adyb2, d1adyc2, d1adyd2
    protein/RNA complex; complexed with ham, so4
  2. Domain d1adyb1: 1ady B:326-421 [33193]
    Other proteins in same PDB: d1adya2, d1adyb2, d1adyc2, d1adyd2
    protein/RNA complex; complexed with ham, so4
  3. Domain d1adyc1: 1ady C:326-421 [33194]
    Other proteins in same PDB: d1adya2, d1adyb2, d1adyc2, d1adyd2
    protein/RNA complex; complexed with ham, so4
  4. Domain d1adyd1: 1ady D:326-421 [33195]
    Other proteins in same PDB: d1adya2, d1adyb2, d1adyc2, d1adyd2
    protein/RNA complex; complexed with ham, so4
3. Domain for 1h4v:
  - Domain d1h4vb1: 1h4v B:326-421 [60624]
    Other proteins in same PDB: d1h4vb2
    complexed with so4

More info for Protein Histidyl-tRNA synthetase (HisRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS

Timeline for Protein Histidyl-tRNA synthetase (HisRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS:

Protein Histidyl-tRNA synthetase (HisRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS first appeared (with stable ids) in SCOP 1.55
Protein Histidyl-tRNA synthetase (HisRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS appears in SCOPe 2.07