SCOPe 2.08: Protein: Threonyl-tRNA synthetase (ThrRS), C-terminal domain

Lineage for Protein: Threonyl-tRNA synthetase (ThrRS), C-terminal domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
Superfamily c.51.1: Class II aaRS ABD-related [52954] (3 families)
Family c.51.1.1: Anticodon-binding domain of Class II aaRS [52955] (6 proteins)
Protein Threonyl-tRNA synthetase (ThrRS), C-terminal domain [52962] (2 species)

Species:

Escherichia coli [TaxId:562] [52963] (5 PDB entries)

Domains for 1evk:
1. Domain d1evka1: 1evk A:533-642 [33208]
  Other proteins in same PDB: d1evka2, d1evkb2
  a truncated form of the enzyme
  complexed with thr, zn
2. Domain d1evkb1: 1evk B:533-642 [33209]
  Other proteins in same PDB: d1evka2, d1evkb2
  a truncated form of the enzyme
  complexed with thr, zn
Domains for 1evl:
1. Domain d1evla1: 1evl A:533-642 [33202]
  Other proteins in same PDB: d1evla2, d1evlb2, d1evlc2, d1evld2
  a truncated form of the enzyme
  complexed with tsb, zn
2. Domain d1evlb1: 1evl B:533-642 [33203]
  Other proteins in same PDB: d1evla2, d1evlb2, d1evlc2, d1evld2
  a truncated form of the enzyme
  complexed with tsb, zn
3. Domain d1evlc1: 1evl C:533-642 [33204]
  Other proteins in same PDB: d1evla2, d1evlb2, d1evlc2, d1evld2
  a truncated form of the enzyme
  complexed with tsb, zn
4. Domain d1evld1: 1evl D:533-642 [33205]
  Other proteins in same PDB: d1evla2, d1evlb2, d1evlc2, d1evld2
  a truncated form of the enzyme
  complexed with tsb, zn
Domains for 1fyf:
1. Domain d1fyfa1: 1fyf A:533-642 [33206]
  Other proteins in same PDB: d1fyfa2, d1fyfb2
  a truncated form of the enzyme
  protein/RNA complex; complexed with ssa, zn
2. Domain d1fyfb1: 1fyf B:533-642 [33207]
  Other proteins in same PDB: d1fyfa2, d1fyfb2
  a truncated form of the enzyme
  protein/RNA complex; complexed with ssa, zn

Domains for 1kog:

Domain d1koga1: 1kog A:533-642 [72805]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogb1: 1kog B:533-642 [72807]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogc1: 1kog C:533-642 [72809]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogd1: 1kog D:533-642 [72811]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1koge1: 1kog E:533-642 [72813]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogf1: 1kog F:533-642 [72815]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogg1: 1kog G:533-642 [72817]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain d1kogh1: 1kog H:533-642 [72819]
Other proteins in same PDB: d1koga2, d1kogb2, d1kogc2, d1kogd2, d1koge2, d1kogf2, d1kogg2, d1kogh2
a truncated form of the enzyme
protein/RNA complex; complexed with tsb, zn

Domain for 1qf6:
- Domain d1qf6a1: 1qf6 A:533-642 [33210]
  Other proteins in same PDB: d1qf6a2, d1qf6a3, d1qf6a4
  protein/RNA complex; complexed with amp, zn

Staphylococcus aureus [TaxId:1280] [102469] (2 PDB entries)
1. Domains for 1nyq:
  1. Domain d1nyqa1: 1nyq A:533-645 [92346]
    Other proteins in same PDB: d1nyqa2, d1nyqa3, d1nyqa4, d1nyqb2, d1nyqb3, d1nyqb4
    protein/RNA complex; complexed with tsb, zn
  2. Domain d1nyqb1: 1nyq B:533-645 [92350]
    Other proteins in same PDB: d1nyqa2, d1nyqa3, d1nyqa4, d1nyqb2, d1nyqb3, d1nyqb4
    protein/RNA complex; complexed with tsb, zn
2. Domains for 1nyr:
  1. Domain d1nyra1: 1nyr A:533-645 [92354]
    Other proteins in same PDB: d1nyra2, d1nyra3, d1nyra4, d1nyrb2, d1nyrb3, d1nyrb4
    protein/RNA complex; complexed with atp, thr, zn
  2. Domain d1nyrb1: 1nyr B:533-645 [92358]
    Other proteins in same PDB: d1nyra2, d1nyra3, d1nyra4, d1nyrb2, d1nyrb3, d1nyrb4
    protein/RNA complex; complexed with atp, thr, zn

More info for Protein Threonyl-tRNA synthetase (ThrRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS

Timeline for Protein Threonyl-tRNA synthetase (ThrRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS:

Protein Threonyl-tRNA synthetase (ThrRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS first appeared (with stable ids) in SCOP 1.55
Protein Threonyl-tRNA synthetase (ThrRS), C-terminal domain from c.51.1.1: Anticodon-binding domain of Class II aaRS appears in SCOPe 2.07