SCOP 1.75: Protein: Dihydrolipoamide dehydrogenase

Lineage for Protein: Dihydrolipoamide dehydrogenase

Root: SCOP 1.75
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.3: FAD/NAD(P)-binding domain [51904] (1 superfamily)
core: 3 layers, b/b/a; central parallel beta-sheet of 5 strands, order 32145; top antiparallel beta-sheet of 3 strands, meander
Superfamily c.3.1: FAD/NAD(P)-binding domain [51905] (8 families)

Family c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains [51943] (15 proteins)
duplication: both domains have similar folds and functions
most members of the family contain common C-terminal alpha+beta domain

Protein Dihydrolipoamide dehydrogenase [51959] (8 species)

Species:

Azotobacter vinelandii [TaxId:354] [51962] (1 PDB entry)
- Domains for 3lad:
  1. Domain d3lada1: 3lad A:1-158,A:278-348 [30573]
    Other proteins in same PDB: d3lada3, d3ladb3
  2. Domain d3lada2: 3lad A:159-277 [30574]
    Other proteins in same PDB: d3lada3, d3ladb3
  3. Domain d3ladb1: 3lad B:1-158,B:278-348 [30575]
    Other proteins in same PDB: d3lada3, d3ladb3
  4. Domain d3ladb2: 3lad B:159-277 [30576]
    Other proteins in same PDB: d3lada3, d3ladb3
    complexed with fad
Bacillus stearothermophilus [TaxId:1422] [51963] (1 PDB entry)
- Domains for 1ebd:
  1. Domain d1ebda1: 1ebd A:7-154,A:272-346 [30577]
    Other proteins in same PDB: d1ebda3, d1ebdb3, d1ebdc_
  2. Domain d1ebda2: 1ebd A:155-271 [30578]
    Other proteins in same PDB: d1ebda3, d1ebdb3, d1ebdc_
  3. Domain d1ebdb1: 1ebd B:7-154,B:272-346 [30579]
    Other proteins in same PDB: d1ebda3, d1ebdb3, d1ebdc_
  4. Domain d1ebdb2: 1ebd B:155-271 [30580]
    Other proteins in same PDB: d1ebda3, d1ebdb3, d1ebdc_
    complexed with fad
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [63950] (2 PDB entries)
1. Domains for 1jeh:
  1. Domain d1jeha1: 1jeh A:1-160,A:283-355 [62912]
    Other proteins in same PDB: d1jeha3, d1jehb3
  2. Domain d1jeha2: 1jeh A:161-282 [62913]
    Other proteins in same PDB: d1jeha3, d1jehb3
  3. Domain d1jehb1: 1jeh B:1-160,B:283-355 [62915]
    Other proteins in same PDB: d1jeha3, d1jehb3
  4. Domain d1jehb2: 1jeh B:161-282 [62916]
    Other proteins in same PDB: d1jeha3, d1jehb3
    complexed with fad
2. Domains for 1v59:
  1. Domain d1v59a1: 1v59 A:1-160,A:283-355 [119838]
    Other proteins in same PDB: d1v59a3, d1v59b3
    automatically matched to d1jeha1
    complexed with fad, nad, po4
  2. Domain d1v59a2: 1v59 A:161-282 [119839]
    Other proteins in same PDB: d1v59a3, d1v59b3
    automatically matched to d1jeha2
    complexed with fad, nad, po4
  3. Domain d1v59b1: 1v59 B:1-160,B:283-355 [119841]
    Other proteins in same PDB: d1v59a3, d1v59b3
    automatically matched to d1jeha1
    complexed with fad, nad, po4
  4. Domain d1v59b2: 1v59 B:161-282 [119842]
    Other proteins in same PDB: d1v59a3, d1v59b3
    automatically matched to d1jeha2
    complexed with fad, nad, po4
Garden pea (Pisum sativum) [TaxId:3888] [51965] (1 PDB entry)
- Domains for 1dxl:
  1. Domain d1dxla1: 1dxl A:4-152,A:276-347 [30585]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  2. Domain d1dxla2: 1dxl A:153-275 [30586]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  3. Domain d1dxlb1: 1dxl B:4-152,B:276-347 [30587]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  4. Domain d1dxlb2: 1dxl B:153-275 [30588]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  5. Domain d1dxlc1: 1dxl C:4-152,C:276-347 [30589]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  6. Domain d1dxlc2: 1dxl C:153-275 [30590]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  7. Domain d1dxld1: 1dxl D:4-152,D:276-347 [30591]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
  8. Domain d1dxld2: 1dxl D:153-275 [30592]
    Other proteins in same PDB: d1dxla3, d1dxlb3, d1dxlc3, d1dxld3
    complexed with fad
Mycobacterium tuberculosis [TaxId:1773] [117441] (1 PDB entry)
Uniprot O53355
- Domains for 1xdi:
  1. Domain d1xdia1: 1xdi A:2-161,A:276-348 [115160]
    Other proteins in same PDB: d1xdia2, d1xdib2
  2. Domain d1xdib1: 1xdi B:2-161,B:276-348 [115162]
    Other proteins in same PDB: d1xdia2, d1xdib2
    complexed with fad
Neisseria meningitidis [TaxId:487] [51964] (2 PDB entries)
1. Domains for 1bhy:
  1. Domain d1bhya1: 1bhy A:117-275,A:401-470 [30583]
    Other proteins in same PDB: d1bhya3
  2. Domain d1bhya2: 1bhy A:276-400 [30584]
    Other proteins in same PDB: d1bhya3
    complexed with fad
2. Domains for 1ojt:
  1. Domain d1ojta1: 1ojt A:117-275,A:401-470 [30581]
    Other proteins in same PDB: d1ojta3
  2. Domain d1ojta2: 1ojt A:276-400 [30582]
    Other proteins in same PDB: d1ojta3
    complexed with fad
Pseudomonas fluorescens [TaxId:294] [51961] (1 PDB entry)
- Domains for 1lpf:
  1. Domain d1lpfa1: 1lpf A:1-158,A:278-348 [30569]
    Other proteins in same PDB: d1lpfa3, d1lpfb3
  2. Domain d1lpfa2: 1lpf A:159-277 [30570]
    Other proteins in same PDB: d1lpfa3, d1lpfb3
  3. Domain d1lpfb1: 1lpf B:1-158,B:278-348 [30571]
    Other proteins in same PDB: d1lpfa3, d1lpfb3
  4. Domain d1lpfb2: 1lpf B:159-277 [30572]
    Other proteins in same PDB: d1lpfa3, d1lpfb3
    complexed with fad
Pseudomonas putida [TaxId:303] [51960] (1 PDB entry)
- Domains for 1lvl:
  1. Domain d1lvla1: 1lvl A:1-150,A:266-335 [30567]
    Other proteins in same PDB: d1lvla3
  2. Domain d1lvla2: 1lvl A:151-265 [30568]
    Other proteins in same PDB: d1lvla3
    complexed with fad, nad

More info for Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains

Timeline for Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains:

Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains first appeared (with stable ids) in SCOP 1.55
Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains appears in SCOP 1.73
Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains appears in SCOPe 2.01
Protein Dihydrolipoamide dehydrogenase from c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains last appears in SCOPe 2.07