SCOP 1.67: Protein: beta-Amylase

Lineage for Protein: beta-Amylase

Root: SCOP 1.67
Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (10 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein beta-Amylase [51481] (3 species)
Common fold covers whole protein structure

Species:

Barley (Hordeum vulgare) [TaxId:4513] [51483] (1 PDB entry)
- Domain for 1b1y:
  - Domain d1b1ya_: 1b1y A: [28796]
    complexed with glc; mutant
Soybean (Glycine max) [TaxId:3847] [51482] (13 PDB entries)
1. Domain for 1bfn:
  - Domain d1bfn__: 1bfn - [28792]
    complexed with glc, so4
2. Domain for 1btc:
  - Domain d1btc__: 1btc - [28791]
    complexed with glc, seo, so4
3. Domain for 1bya:
  - Domain d1bya__: 1bya - [28795]
    complexed with so4
4. Domain for 1byb:
  - Domain d1byb__: 1byb - [28790]
    complexed with glc, so4
5. Domain for 1byc:
  - Domain d1byc__: 1byc - [28793]
    complexed with glc, so4
6. Domain for 1byd:
  - Domain d1byd__: 1byd - [28794]
    complexed with dom, so4
7. Domain for 1q6c:
  - Domain d1q6ca_: 1q6c A: [95970]
    complexed with glc, so4
8. Domain for 1q6d:
  - Domain d1q6da_: 1q6d A: [95971]
    complexed with glc, so4; mutant
9. Domain for 1q6e:
  - Domain d1q6ea_: 1q6e A: [95972]
    complexed with glc, so4; mutant
10. Domain for 1q6f:
  - Domain d1q6fa_: 1q6f A: [95973]
    complexed with glc, so4; mutant
11. Domain for 1q6g:
  - Domain d1q6ga_: 1q6g A: [95974]
    complexed with glc, so4; mutant
12. Domains for 1uko:
  1. Domain d1ukoa_: 1uko A: [99501]
  2. Domain d1ukob_: 1uko B: [99502]
  3. Domain d1ukoc_: 1uko C: [99503]
  4. Domain d1ukod_: 1uko D: [99504]
    complexed with so4; mutant
13. Domains for 1ukp:
  1. Domain d1ukpa_: 1ukp A: [99505]
  2. Domain d1ukpb_: 1ukp B: [99506]
  3. Domain d1ukpc_: 1ukp C: [99507]
  4. Domain d1ukpd_: 1ukp D: [99508]
    complexed with so4; mutant
Sweet potato (Ipomoea batatas) [TaxId:4120] [51484] (1 PDB entry)
- Domain for 1fa2:
  - Domain d1fa2a_: 1fa2 A: [28797]
    complexed with dom, dtt

More info for Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain:

Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein beta-Amylase from c.1.8.2: beta-Amylase
Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.65
Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain appears in SCOP 1.69
Protein beta-Amylase from c.1.8.1: Amylase, catalytic domain appears in the current release, SCOPe 2.08