SCOPe 2.04: Fold a.118: alpha-alpha superhelix

Lineage for Fold a.118: alpha-alpha superhelix

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

Superfamilies:

1. a.118.1: ARM repeat [48371] (26 families)

2. a.118.3: Sec7 domain [48425] (2 families)

3. a.118.4: Lipovitellin-phosvitin complex, superhelical domain [48431] (1 family)

4. a.118.5: Bacterial muramidases [48435] (1 family)

5. a.118.6: Protein prenylyltransferase [48439] (1 family)

6. a.118.7: 14-3-3 protein [48445] (1 family)
   automatically mapped to Pfam PF00244

7. a.118.8: TPR-like [48452] (9 families)

8. a.118.9: ENTH/VHS domain [48464] (5 families)

9. a.118.11: Cytochrome c oxidase subunit E [48479] (1 family)
   automatically mapped to Pfam PF02284

10. a.118.12: Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain [69099] (1 family)
    automatically mapped to Pfam PF07834

11. a.118.13: Arp2/3 complex 16 kDa subunit ARPC5 [69103] (1 family)
    automatically mapped to Pfam PF04699

12. a.118.14: FliG [48029] (2 families)
    fragmented superhelix; consist of 3/4-helical motifs and connecting helices

13. a.118.15: Aconitase B, N-terminal domain [74778] (1 family)
    automatically mapped to Pfam PF11791

14. a.118.16: Translin [74784] (2 families)
    automatically mapped to Pfam PF01997

15. a.118.17: Cullin repeat-like [74788] (3 families)

16. a.118.18: HCP-like [81901] (1 family)

17. a.118.19: C-terminal domain of Ku80 [101420] (1 family)
    automatically mapped to Pfam PF08785

18. a.118.20: Hypothetical protein ST1625 [101424] (1 family)
    automatically mapped to Pfam PF09205

19. a.118.21: Chemosensory protein Csp2 [100910] (2 families)
    automatically mapped to Pfam PF03392

20. a.118.22: IP3 receptor type 1 binding core, domain 2 [100909] (1 family)
    automatically mapped to Pfam PF01365

21. a.118.23: USP8 N-terminal domain-like [140856] (1 family)

22. a.118.24: Pseudo ankyrin repeat-like [140860] (1 family)
    contains three helices per turn of the superhelix

23. a.118.25: TROVE domain-like [140864] (1 family)
    consist of two superhelical sections arranged like a horse-shoe
    automatically mapped to Pfam PF05731

24. a.118.26: MgtE N-terminal domain-like [158791] (2 families)
    made of short helices; approximately 2.5 helices per turn of superhelix
    automatically mapped to Pfam PF03448

More info for Fold a.118: alpha-alpha superhelix

Timeline for Fold a.118: alpha-alpha superhelix:

• Fold a.118: alpha-alpha superhelix first appeared (with stable ids) in SCOP 1.55
  
• Fold a.118: alpha-alpha superhelix appears in SCOPe 2.03
  
• Fold a.118: alpha-alpha superhelix appears in SCOPe 2.05
  
• Fold a.118: alpha-alpha superhelix appears in the current release, SCOPe 2.08