SCOPe 2.08: Domain d7vvaa_: 7vva A:

Lineage for d7vvaa_ (7vva A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.0: automated matches [191321] (1 protein)
   not a true family

6. Protein automated matches [190117] (50 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [188596] (5 PDB entries)

8. Domain d7vvaa_: 7vva A: [422587]
   automated match to d3kzha_
   complexed with fjf

Details for d7vvaa_

PDB Entry: 7vva, 2.75 Å

PDB Description: pseudouridine bound structure of pseudouridine kinase (puki) from escherichia coli strain b

PDB Compounds: (A:) Pseudouridine kinase

SCOPe Domain Sequences for d7vvaa_:

Sequence, based on SEQRES records:

>d7vvaa_ c.72.1.0 (A:) automated matches {Escherichia coli [TaxId: 562]}
ekdyvviigsanidvagysheslnyadsnpgkikftpggvgrniaqnlallgnkawllsa
vgsdfygqslltqtnqsgvyvdkclivpgentssylslldntgemlvaindmnisnaita
eylaqhrefiqrakvivadcniseealawildnaanvpvfvdpvsawkcvkvrdrlnqih
tlkpnrleaetlsgialsgrddvakvaawfhqhglnrlvlsmggdgvyysdirgengwsa
piktnvinvtgagdammaglascwvdgmpfaesvrfaqgcssmalsceytnnpdlsianv
islvena

Sequence, based on observed residues (ATOM records):

>d7vvaa_ c.72.1.0 (A:) automated matches {Escherichia coli [TaxId: 562]}
ekdyvviigsanidvagysheslnyadsnpgkikftpggvgrniaqnlallgnkawllsa
vgsdfygqslltqtnqsgvyvdkclivpgentssylslldmlvaindmnisnaitaeyla
qhrefiqrakvivadcniseealawildnaanvpvfvdpvsawkcvkvrdrlnqihtlkp
nrleaetlsgialsgrddvakvaawfhqhglnrlvlsmggdgvyysdirgengwsapikt
nvinvtgagdammaglascwvdgmpfaesvrfaqgcssmalsceytnnpdlsianvislv
ena

Timeline for d7vvaa_:

• d7vvaa_ is new in SCOPe 2.08-stable