Lineage for d4np4h_ (4np4 H:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2754035Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2754036Protein automated matches [190740] (31 species)
    not a true protein
  7. 2754280Species Human (Homo sapiens) [TaxId:9606] [187920] (1793 PDB entries)
  8. 2759056Domain d4np4h_: 4np4 H: [409260]
    Other proteins in same PDB: d4np4l1, d4np4l2, d4np4m1, d4np4m2
    automated match to d6shgh_

Details for d4np4h_

PDB Entry: 4np4 (more details), 2.89 Å

PDB Description: clostridium difficile toxin b crop domain in complex with fab domains of neutralizing antibody bezlotoxumab
PDB Compounds: (H:) bezlotoxumab heavy chain

SCOPe Domain Sequences for d4np4h_:

Sequence, based on SEQRES records: (download)

>d4np4h_ b.1.1.0 (H:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvqsgaevkksgeslkisckgsgysftsywigwvrqmpgkglewmgifypgdsstry
spsfqgqvtisadksvntaylqwsslkasdtamyycarrrnwgnafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepks

Sequence, based on observed residues (ATOM records): (download)

>d4np4h_ b.1.1.0 (H:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvqsgaevkksgeslkisckgsgysftsywigwvrqmpgkglewmgifypgdsstry
spsfqgqvtisadksvntaylqwsslkasdtamyycarrrnwgnafdiwgqgtmvtvssa
stkgpsvfplapsstaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslss
vvtvpssslgtqtyicnvnhkpsntkvdkrvepks

SCOPe Domain Coordinates for d4np4h_:

Click to download the PDB-style file with coordinates for d4np4h_.
(The format of our PDB-style files is described here.)

Timeline for d4np4h_:

  • d4np4h_ is new in SCOPe 2.08-stable