Lineage for d3ivka_ (3ivk A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2744177Species Mouse (Mus musculus) [TaxId:10090] [186842] (622 PDB entries)
  8. 2745359Domain d3ivka_: 3ivk A: [408426]
    Other proteins in same PDB: d3ivkb1, d3ivkb2, d3ivkl1, d3ivkl2
    automated match to d6shgh_
    protein/RNA complex; complexed with cd, cl, mg

Details for d3ivka_

PDB Entry: 3ivk (more details), 3.1 Å

PDB Description: crystal structure of the catalytic core of an rna polymerase ribozyme complexed with an antigen binding antibody fragment
PDB Compounds: (A:) Fab heavy chain

SCOPe Domain Sequences for d3ivka_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ivka_ b.1.1.1 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
sevqlvesggglvqpggslrlscaasgfyisyssihwvrqapgkglewvasispysgsty
yadsvkgrftisadtskntaylqmnslraedtavyycarqgyrrrsgrgfdywgqgtlvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

SCOPe Domain Coordinates for d3ivka_:

Click to download the PDB-style file with coordinates for d3ivka_.
(The format of our PDB-style files is described here.)

Timeline for d3ivka_:

  • d3ivka_ is new in SCOPe 2.08-stable