SCOPe 2.08: Domain d1atia2: 1ati A:1-394

Lineage for d1atia2 (1ati A:1-394)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain [55682] (16 proteins)

6. Protein Glycyl-tRNA synthetase (GlyRS) [55692] (1 species)

7. Species Thermus thermophilus [TaxId:274] [55693] (3 PDB entries)

8. Domain d1atia2: 1ati A:1-394 [40745]
   Other proteins in same PDB: d1atia1, d1atib1
   has additional insertions and/or extensions that are not grouped together

Details for d1atia2

PDB Entry: 1ati, 2.75 Å

PDB Description: crystal structure of glycyl-trna synthetase from thermus thermophilus

PDB Compounds: (A:) GLYCYL-tRNA SYNTHETASE

SCOPe Domain Sequences for d1atia2:

Sequence, based on SEQRES records:

>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnritkkryrldhllkeqpeevlkrlyramev
eeenlhalvqammqaperaggamtaagvldpasgepgdwtppryfnmmfqdlrgprggrg
llaylrpetaqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmei
eyfvrpgedeywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfph
gslelegiaqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviep
sagvdrgvlallaeaftreelpngeerivlklkp

Sequence, based on observed residues (ATOM records):

>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnwtppryfnmmfqdlrgprggrgllaylrpe
taqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmeieyfvrpge
deywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfphgslelegi
aqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviepsagvdrgv
lallaeaftreelpngeerivlklkp

Timeline for d1atia2:

• d1atia2 first appeared (with stable ids) in SCOP 1.55
  
• d1atia2 appears in SCOPe 2.07