Lineage for d7beme_ (7bem E:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010708Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 3010709Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 3010710Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
    part of PfamB PB000266
  6. 3010711Protein Spike protein S1 [143589] (5 species)
  7. 3010746Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (118 PDB entries)
  8. 3010813Domain d7beme_: 7bem E: [398476]
    Other proteins in same PDB: d7bemh_, d7beml_
    automated match to d2dd8s1
    complexed with cl, gol, po4, pro

Details for d7beme_

PDB Entry: 7bem (more details), 2.52 Å

PDB Description: crystal structure of the receptor binding domain of sars-cov-2 spike glycoprotein in complex with covox-269 scfv
PDB Compounds: (E:) Spike glycoprotein

SCOPe Domain Sequences for d7beme_:

Sequence; same for both SEQRES and ATOM records: (download)

>d7beme_ d.318.1.1 (E:) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
nlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcft
nvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyly
rlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvvl
sfellh

SCOPe Domain Coordinates for d7beme_:

Click to download the PDB-style file with coordinates for d7beme_.
(The format of our PDB-style files is described here.)

Timeline for d7beme_: