SCOPe 2.08: Family d.318.1.1: SARS receptor-binding domain-like

Lineage for Family d.318.1.1: SARS receptor-binding domain-like

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
   core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542

4. Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family)
   automatically mapped to Pfam PF09408

5. Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
   part of PfamB PB000266

Proteins:

1. Spike protein S1 [143589] (5 species)

   1. Species Bat sars-like coronavirus [TaxId:1508227] [381993] (1 PDB entry)

   2. Species Murine hepatitis virus (strain a59) [TaxID:11142] [419610] (1 PDB entry)

   3. Species Sars coronavirus ma15 [TaxId:633137] [402331] (1 PDB entry)

   4. Species SARS coronavirus [TaxId:227859] [143590] (14 PDB entries)
      Uniprot P59594 320-502! Uniprot P59594 321-512! Uniprot P59594 323-502

   5. Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (118 PDB entries)

2. automated matches [420532] (2 species)
   not a true protein

   1. Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [420533] (4 PDB entries)

   2. Species Bat coronavirus ratg13 [TaxId:2709072] [421364] (1 PDB entry)

More info for Family d.318.1.1: SARS receptor-binding domain-like

Timeline for Family d.318.1.1: SARS receptor-binding domain-like:

• Family d.318.1.1: SARS receptor-binding domain-like first appeared in SCOP 1.73
  
• Family d.318.1.1: SARS receptor-binding domain-like appears in SCOPe 2.07