SCOP 1.63: Domain d1rldb2: 1rld B:22-147

Lineage for d1rldb2 (1rld B:22-147)

1. Root: SCOP 1.63

2. Class d: Alpha and beta proteins (a+b) [53931] (224 folds)

3. Fold d.58: Ferredoxin-like [54861] (44 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (1 family)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (8 species)

7. Species Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId:4097] [54969] (5 PDB entries)

8. Domain d1rldb2: 1rld B:22-147 [39235]
   Other proteins in same PDB: d1rlda1, d1rldb1, d1rlds_, d1rldt_

Details for d1rldb2

PDB Entry: 1rld, 2.5 Å

PDB Description: solid-state phase transition in the crystal structure of ribulose 1,5-biphosphate carboxylase(slash)oxygenase

SCOP Domain Sequences for d1rldb2:

Sequence, based on SEQRES records:

>d1rldb2 d.58.9.1 (B:22-147) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Tobacco (Nicotiana tabacum), variant turkish samsun}
ltyytpeyqtkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwtdgltsldryk
grcyriervvgekdqyiayvaypldlfeegsvtnmftsivgnvfgfkalralrledlrip
payvkt

Sequence, based on observed residues (ATOM records):

>d1rldb2 d.58.9.1 (B:22-147) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Tobacco (Nicotiana tabacum), variant turkish samsun}
ltyytpeyqtkdtdilaafrvtpqpgvppeeagaavaaesstvwtdgltsldrykgrcyr
iervvgekdqyiayvaypldlfeegsvtnmftsivgnvfgfkalralrledlrippayvk
t

Timeline for d1rldb2:

• d1rldb2 first appeared (with stable ids) in SCOP 1.55
  
• d1rldb2 appears in SCOP 1.61
  
• d1rldb2 appears in SCOP 1.65
  
• d1rldb2 appears in the current release, SCOPe 2.08