SCOPe 2.08: Domain d1bknb1: 1bkn B:617-731

Lineage for d1bknb1 (1bkn B:617-731)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins)

6. Protein DNA mismatch repair protein MutL [54225] (1 species)

7. Species Escherichia coli [TaxId:562] [54226] (6 PDB entries)

8. Domain d1bknb1: 1bkn B:617-731 [37569]
   Other proteins in same PDB: d1bkna2, d1bknb2

Details for d1bknb1

PDB Entry: 1bkn, 2.9 Å

PDB Description: crystal structure of an n-terminal 40kd fragment of e. coli dna mismatch repair protein mutl

PDB Compounds: (B:) mutl

SCOPe Domain Sequences for d1bknb1:

Sequence, based on SEQRES records:

>d1bknb1 d.14.1.3 (B:617-731) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
gtafleqalaiewqhgdltlrgwvadpnhttpalaeiqycyvngrmmrdrlinhairqac
edklgadqqpafvlyleidphqvdvnvhpakhevrfhqsrlvhdfiyqgvlsvlq

Sequence, based on observed residues (ATOM records):

>d1bknb1 d.14.1.3 (B:617-731) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
gtafleqalaiewqhgdltlrgwvadpnhttpalaeiqycyvngrmmrdrlinhairqac
edklgadqqpafvlyleidphqvhqsrlvhdfiyqgvlsvlq

Timeline for d1bknb1:

• d1bknb1 first appeared (with stable ids) in SCOP 1.55
  
• d1bknb1 appears in SCOPe 2.07