SCOPe 2.07: Domain d6nxdd1: 6nxd D:1-337

Lineage for d6nxdd1 (6nxd D:1-337)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
   consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
   Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
   Domain 2 has parallel beta-sheet of 4 strands, order 1234

4. Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families)

5. Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
   automatically mapped to Pfam PF00710

6. Protein automated matches [190446] (9 species)
   not a true protein

7. Species Escherichia coli [TaxId:83333] [372613] (2 PDB entries)

8. Domain d6nxdd1: 6nxd D:1-337 [372707]
   Other proteins in same PDB: d6nxdb2, d6nxdd2
   automated match to d2p2dd_
   complexed with asn, cit, cl, edo

Details for d6nxdd1

PDB Entry: 6nxd, 1.9 Å

PDB Description: type i l-asparaginase from escherichia coli in complex with citrate at ph 4

PDB Compounds: (D:) L-asparaginase 1

SCOPe Domain Sequences for d6nxdd1:

Sequence, based on SEQRES records:

>d6nxdd1 c.88.1.1 (D:1-337) automated matches {Escherichia coli [TaxId: 83333]}
mqkksiyvaytggtigmqrseqgyipvsghlqrqlalmpefhrpempdftiheytplmds
sdmtpedwqhiaedikahyddydgfvilhgtdtmaytasalsfmlenlgkpvivtgsqip
laelrsdgqinllnalyvaanypinevtlffnnrlyrgnrttkahadgfdafaspnlppl
leagihirrlntppaphgegelivhpitpqpigvvtiypgisadvvrnflrqpvkalilr
sygvgnapqnkaflqelqeasdrgivvvnltqcmsgkvnmggyatgnalahagviggadm
tveatltklhyllsqeldtetirkamsqnlrgeltpd

Sequence, based on observed residues (ATOM records):

>d6nxdd1 c.88.1.1 (D:1-337) automated matches {Escherichia coli [TaxId: 83333]}
mqkksiyvaytggtigmqhlqrqlalmpefhrpempdftiheytplmdssdmtpedwqhi
aedikahyddydgfvilhgtdtmaytasalsfmlenlgkpvivtgsqiplaelrsdgqin
llnalyvaanypinevtlffnnrlyrgnrttkahadgfdafaspnlpplleagihirrln
tppaphgegelivhpitpqpigvvtiypgisadvvrnflrqpvkalilrsygvgnapqnk
aflqelqeasdrgivvvnltqcmsgkvnalahagviggadmtveatltklhyllsqeldt
etirkamsqnlrgeltpd

Timeline for d6nxdd1:

• d6nxdd1 is new in SCOPe 2.07-stable
  
• d6nxdd1 appears in the current release, SCOPe 2.08