Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2518698Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 2518699Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 2518700Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
    automatically mapped to Pfam PF00710
  6. 2518951Protein automated matches [190446] (9 species)
    not a true protein

Species:

  1. 2518952Dickeya chrysanthemi [TaxId:556] [313884] (5 PDB entries)
    1. Domains for 5f52:
      1. 2518960Domain d5f52a_: 5f52 A: [313885]
        automated match to d1hg0a_
        complexed with asp, peg
      2. 2518961Domain d5f52b_: 5f52 B: [313951]
        automated match to d1hg0a_
        complexed with asp, peg
      3. 2518962Domain d5f52c_: 5f52 C: [313902]
        automated match to d1hg0a_
        complexed with asp, peg
      4. 2518963Domain d5f52d_: 5f52 D: [313956]
        automated match to d1hg0a_
        complexed with asp, peg
    2. Domains for 5hw0:
      1. 2518964Domain d5hw0a_: 5hw0 A: [314993]
        automated match to d1hg0a_
        complexed with glu
      2. 2518965Domain d5hw0b_: 5hw0 B: [314800]
        automated match to d1hg0a_
        complexed with glu
      3. 2518966Domain d5hw0c_: 5hw0 C: [314927]
        automated match to d1hg0a_
        complexed with glu
      4. 2518967Domain d5hw0d_: 5hw0 D: [314801]
        automated match to d1hg0a_
        complexed with glu
    3. Domains for 5i3z:
      1. 2518968Domain d5i3za_: 5i3z A: [319318]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2518969Domain d5i3zb_: 5i3z B: [319282]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2518970Domain d5i3zc_: 5i3z C: [319319]
        automated match to d1hg0a_
        complexed with asp; mutant
      4. 2518971Domain d5i3zd_: 5i3z D: [319301]
        automated match to d1hg0a_
        complexed with asp; mutant
    4. Domains for 5i48:
      1. 2518953Domain d5i48a_: 5i48 A: [319325]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2518954Domain d5i48b_: 5i48 B: [319307]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2518955Domain d5i48c_: 5i48 C: [319337]
        automated match to d1hg0a_
        complexed with asp; mutant
      4. 2518956Domain d5i48d_: 5i48 D: [319312]
        automated match to d1hg0a_
        complexed with asp; mutant
    5. Domains for 5i4b:
      1. 2518957Domain d5i4ba_: 5i4b A: [319327]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2518958Domain d5i4bb_: 5i4b B: [319317]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2518959Domain d5i4bc_: 5i4b C: [319349]
        automated match to d1hg0a_
        complexed with asp; mutant
  2. 2518972Escherichia coli [TaxId:562] [225264] (4 PDB entries)
    1. Domains for 2him:
      1. 2518977Domain d2hima_: 2him A: [204560]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      2. 2518978Domain d2himb1: 2him B:1-337 [204561]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      3. 2518979Domain d2himc_: 2him C: [204562]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      4. 2518980Domain d2himd1: 2him D:1-337 [204563]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
    2. Domains for 2p2d:
      1. 2518973Domain d2p2da_: 2p2d A: [205415]
        automated match to d3ntxa_
        complexed with gol
      2. 2518974Domain d2p2db_: 2p2d B: [205416]
        automated match to d3ntxa_
        complexed with gol
      3. 2518975Domain d2p2dc_: 2p2d C: [205417]
        automated match to d3ntxa_
        complexed with gol
      4. 2518976Domain d2p2dd_: 2p2d D: [205418]
        automated match to d3ntxa_
        complexed with gol
    3. Domains for 2p2n:
      1. 2518981Domain d2p2na_: 2p2n A: [205431]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      2. 2518982Domain d2p2nb1: 2p2n B:1-337 [205432]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      3. 2518983Domain d2p2nc_: 2p2n C: [205433]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      4. 2518984Domain d2p2nd1: 2p2n D:1-337 [205434]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
    4. Domains for 5mq5:
      1. 2518985Domain d5mq5a1: 5mq5 A:1-326 [341550]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      2. 2518986Domain d5mq5b_: 5mq5 B: [341528]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      3. 2518987Domain d5mq5c_: 5mq5 C: [341540]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      4. 2518988Domain d5mq5d_: 5mq5 D: [341530]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
  3. 2518989Escherichia coli [TaxId:83333] [372613] (2 PDB entries)
    1. Domains for 6nxc:
      1. 2518990Domain d6nxca_: 6nxc A: [372644]
        Other proteins in same PDB: d6nxcb2, d6nxcd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo, gol; mutant
      2. 2518991Domain d6nxcb1: 6nxc B:1-337 [372623]
        Other proteins in same PDB: d6nxcb2, d6nxcd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo, gol; mutant
      3. 2518992Domain d6nxcc_: 6nxc C: [372641]
        Other proteins in same PDB: d6nxcb2, d6nxcd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo, gol; mutant
      4. 2518993Domain d6nxcd1: 6nxc D:1-337 [372663]
        Other proteins in same PDB: d6nxcb2, d6nxcd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo, gol; mutant
    2. Domains for 6nxd:
      1. 2518994Domain d6nxda_: 6nxd A: [372614]
        Other proteins in same PDB: d6nxdb2, d6nxdd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo
      2. 2518995Domain d6nxdb1: 6nxd B:1-337 [372654]
        Other proteins in same PDB: d6nxdb2, d6nxdd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo
      3. 2518996Domain d6nxdc_: 6nxd C: [372680]
        Other proteins in same PDB: d6nxdb2, d6nxdd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo
      4. 2518997Domain d6nxdd1: 6nxd D:1-337 [372707]
        Other proteins in same PDB: d6nxdb2, d6nxdd2
        automated match to d2p2dd_
        complexed with asn, cit, cl, edo
  4. Methanothermobacter thermautotrophicus [TaxId:145262] [255110] (1 PDB entry)
  5. 2519000Pectobacterium atrosepticum [TaxId:218491] [255007] (1 PDB entry)
  6. 2519009Pectobacterium atrosepticum [TaxId:29471] [187353] (2 PDB entries)
    1. Domains for 2gvn:
      1. 2519010Domain d2gvna_: 2gvn A: [164854]
        automated match to d1hg0a_
        complexed with asp
      2. 2519011Domain d2gvnb_: 2gvn B: [164855]
        automated match to d1hg0a_
        complexed with asp
      3. 2519012Domain d2gvnc_: 2gvn C: [164856]
        automated match to d1hg0a_
        complexed with asp
      4. 2519013Domain d2gvnd_: 2gvn D: [164857]
        automated match to d1hg0a_
        complexed with asp
      5. 2519014Domain d2gvne_: 2gvn E: [164858]
        automated match to d1hg0a_
        complexed with asp
      6. 2519015Domain d2gvnf_: 2gvn F: [164859]
        automated match to d1hg0a_
        complexed with asp
      7. 2519016Domain d2gvng_: 2gvn G: [164860]
        automated match to d1hg0a_
        complexed with asp
      8. 2519017Domain d2gvnh_: 2gvn H: [164861]
        automated match to d1hg0a_
        complexed with asp
    2. Domains for 2hln:
      1. 2519018Domain d2hlna_: 2hln A: [165139]
        automated match to d1hg0a_
        complexed with glu, peg
      2. 2519019Domain d2hlnb_: 2hln B: [165140]
        automated match to d1hg0a_
        complexed with glu, peg
      3. 2519020Domain d2hlnc_: 2hln C: [165141]
        automated match to d1hg0a_
        complexed with glu, peg
      4. 2519021Domain d2hlnd_: 2hln D: [165142]
        automated match to d1hg0a_
        complexed with glu, peg
      5. 2519022Domain d2hlne_: 2hln E: [165143]
        automated match to d1hg0a_
        complexed with glu, peg
      6. 2519023Domain d2hlnf_: 2hln F: [165144]
        automated match to d1hg0a_
        complexed with glu, peg
      7. 2519024Domain d2hlng_: 2hln G: [165145]
        automated match to d1hg0a_
        complexed with glu, peg
      8. 2519025Domain d2hlnh_: 2hln H: [165146]
        automated match to d1hg0a_
        complexed with glu, peg
      9. 2519026Domain d2hlni_: 2hln I: [165147]
        automated match to d1hg0a_
        complexed with glu, peg
      10. 2519027Domain d2hlnj_: 2hln J: [165148]
        automated match to d1hg0a_
        complexed with glu, peg
      11. 2519028Domain d2hlnk_: 2hln K: [165149]
        automated match to d1hg0a_
        complexed with glu, peg
      12. 2519029Domain d2hlnl_: 2hln L: [165150]
        automated match to d1hg0a_
        complexed with glu, peg
  7. 2519030Pectobacterium carotovorum [TaxId:554] [188521] (1 PDB entry)
  8. 2519039Pseudomonas putida [TaxId:160488] [393092] (7 PDB entries)
    1. Domains for 6wyw:
      1. 2519064Domain d6wywa_: 6wyw A: [393157]
        automated match to d4pgaa_
        complexed with asp
      2. 2519065Domain d6wywb_: 6wyw B: [393120]
        automated match to d4pgaa_
        complexed with asp
      3. 2519066Domain d6wywc_: 6wyw C: [393106]
        automated match to d4pgaa_
        complexed with asp
      4. 2519067Domain d6wywd_: 6wyw D: [393107]
        automated match to d4pgaa_
        complexed with asp
    2. Domains for 6wyx:
      1. 2519048Domain d6wyxa_: 6wyx A: [393093]
        automated match to d4pgaa_
        complexed with asp, gol
      2. 2519049Domain d6wyxb_: 6wyx B: [393177]
        automated match to d4pgaa_
        complexed with asp, gol
      3. 2519050Domain d6wyxc_: 6wyx C: [393117]
        automated match to d4pgaa_
        complexed with asp, gol
      4. 2519051Domain d6wyxd_: 6wyx D: [393138]
        automated match to d4pgaa_
        complexed with asp, gol
    3. Domains for 6wyy:
      1. 2519044Domain d6wyya_: 6wyy A: [393115]
        automated match to d4pgaa_
        complexed with edo, glu, gol
      2. 2519045Domain d6wyyb_: 6wyy B: [393149]
        automated match to d4pgaa_
        complexed with edo, glu, gol
      3. 2519046Domain d6wyyc_: 6wyy C: [393166]
        automated match to d4pgaa_
        complexed with edo, glu, gol
      4. 2519047Domain d6wyyd_: 6wyy D: [393105]
        automated match to d4pgaa_
        complexed with edo, glu, gol
    4. Domains for 6wyz:
      1. 2519060Domain d6wyza_: 6wyz A: [393094]
        automated match to d4pgaa_
        complexed with dgl; mutant
      2. 2519061Domain d6wyzb_: 6wyz B: [393100]
        automated match to d4pgaa_
        complexed with dgl; mutant
      3. 2519062Domain d6wyzc_: 6wyz C: [393099]
        automated match to d4pgaa_
        complexed with dgl; mutant
      4. 2519063Domain d6wyzd_: 6wyz D: [393096]
        automated match to d4pgaa_
        complexed with dgl; mutant
    5. Domains for 6wz4:
      1. 2519052Domain d6wz4a_: 6wz4 A: [393095]
        automated match to d4pgaa_
        complexed with asp; mutant
      2. 2519053Domain d6wz4b_: 6wz4 B: [393118]
        automated match to d4pgaa_
        complexed with asp; mutant
      3. 2519054Domain d6wz4c_: 6wz4 C: [393147]
        automated match to d4pgaa_
        complexed with asp; mutant
      4. 2519055Domain d6wz4d_: 6wz4 D: [393109]
        automated match to d4pgaa_
        complexed with asp; mutant
    6. Domains for 6wz6:
      1. 2519040Domain d6wz6a_: 6wz6 A: [393129]
        automated match to d4pgaa_
        complexed with edo, glu; mutant
      2. 2519041Domain d6wz6b_: 6wz6 B: [393163]
        automated match to d4pgaa_
        complexed with edo, glu; mutant
      3. 2519042Domain d6wz6c_: 6wz6 C: [393127]
        automated match to d4pgaa_
        complexed with edo, glu; mutant
      4. 2519043Domain d6wz6d_: 6wz6 D: [393137]
        automated match to d4pgaa_
        complexed with edo, glu; mutant
    7. Domains for 6wz8:
      1. 2519056Domain d6wz8a_: 6wz8 A: [393132]
        automated match to d4pgaa_
        complexed with cit
      2. 2519057Domain d6wz8b_: 6wz8 B: [393097]
        automated match to d4pgaa_
        complexed with cit
      3. 2519058Domain d6wz8c_: 6wz8 C: [393112]
        automated match to d4pgaa_
        complexed with cit
      4. 2519059Domain d6wz8d_: 6wz8 D: [393139]
        automated match to d4pgaa_
        complexed with cit
  9. 2519068Yersinia pestis [TaxId:214092] [189425] (1 PDB entry)

More info for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase

Timeline for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase: