SCOPe 2.08: Domain d1cyqb_: 1cyq B:

Lineage for d1cyqb_ (1cyq B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.4: His-Me finger endonucleases [54059] (1 superfamily)
   core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures

4. Superfamily d.4.1: His-Me finger endonucleases [54060] (8 families)
   common motif contains conserved histidine residue and metal-binding site

5. Family d.4.1.3: Intron-encoded homing endonucleases [54069] (2 proteins)

6. Protein Intron-encoded homing endonuclease I-PpoI [54070] (1 species)

7. Species Slime mold (Physarum polycephalum) [TaxId:5791] [54071] (8 PDB entries)

8. Domain d1cyqb_: 1cyq B: [37148]
   protein/DNA complex; complexed with mg, zn

Details for d1cyqb_

PDB Entry: 1cyq, 1.93 Å

PDB Description: intron encoded homing endonuclease i-ppoi (h98a)/dna homing site complex

PDB Compounds: (B:) intron-encoded homing endonuclease I-ppoi

SCOPe Domain Sequences for d1cyqb_:

Sequence; same for both SEQRES and ATOM records:

>d1cyqb_ d.4.1.3 (B:) Intron-encoded homing endonuclease I-PpoI {Slime mold (Physarum polycephalum) [TaxId: 5791]}
altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfakngptr
wqykrtinqvvhrwgshtvpfllepdningktctasalchntrchnplhlcweslddnkg
rnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv

Timeline for d1cyqb_:

• d1cyqb_ first appeared (with stable ids) in SCOP 1.55
  
• d1cyqb_ appears in SCOPe 2.07