SCOPe 2.08: Domain d6ipja3: 6ipj A:290-494

Lineage for d6ipja3 (6ipj A:290-494)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)

5. Family d.218.1.0: automated matches [227287] (1 protein)
   not a true family

6. Protein automated matches [227105] (6 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [226559] (18 PDB entries)

8. Domain d6ipja3: 6ipj A:290-494 [369397]
   Other proteins in same PDB: d6ipja1, d6ipja2
   automated match to d4lzda3
   protein/DNA complex; complexed with mn, so4, ttp

Details for d6ipja3

PDB Entry: 6ipj, 1.98 Å

PDB Description: binary complex of human dna polymerase mu with mndttp

PDB Compounds: (A:) DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu

SCOPe Domain Sequences for d6ipja3:

Sequence, based on SEQRES records:

>d6ipja3 d.218.1.0 (A:290-494) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllpr
vmcrlqdqglilyhqhqhsccesptrlaqqshmdafersfcifrlpqpgswkavrvdlvv
apvsqfpfallgwtgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrh
lgleylppeqrna

Sequence, based on observed residues (ATOM records):

>d6ipja3 d.218.1.0 (A:290-494) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vlrsdvdalqqvveeavgqalpgatvtltggfrrgklqghdvdflithpkegqeagllpr
vmcrlqdqglilyhqhqhsccafersfcifrlpqpgswkavrvdlvvapvsqfpfallgw
tgsklfqrelrrfsrkekglwlnshglfdpeqktffqaaseedifrhlgleylppeqrna

Timeline for d6ipja3:

• d6ipja3 first appeared in SCOPe 2.07