Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3006866Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 3006867Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) (S)
  5. 3007364Family d.218.1.0: automated matches [227287] (1 protein)
    not a true family
  6. 3007365Protein automated matches [227105] (6 species)
    not a true protein

Species:

  1. Archaeoglobus fulgidus [TaxId:2234] [255725] (2 PDB entries)
    1. Domain for 2zh7:
    2. Domain for 2zhb:
  2. 3007369Escherichia coli [TaxId:83333] [402990] (1 PDB entry)
  3. 3007371Human (Homo sapiens) [TaxId:9606] [226559] (18 PDB entries)
    1. Domains for 4lt6:
      1. 3007387Domain d4lt6a1: 4lt6 A:17-213 [253686]
        Other proteins in same PDB: d4lt6a2, d4lt6a3, d4lt6b2, d4lt6b3
        automated match to d1f5aa4
        complexed with 3at, ca
      2. 3007388Domain d4lt6b1: 4lt6 B:18-213 [253689]
        Other proteins in same PDB: d4lt6a2, d4lt6a3, d4lt6b2, d4lt6b3
        automated match to d1f5aa4
        complexed with 3at, ca
    2. Domain for 4lzd:
    3. Domain for 4xq7:
    4. Domain for 5ool:
    5. Domain for 5oom:
    6. Domain for 5zlc:
    7. Domain for 6aec:
    8. Domain for 6aeh:
    9. Domain for 6ak5:
    10. Domain for 6ak6:
    11. Domain for 6iph:
    12. Domain for 6ipi:
    13. Domain for 6ipj:
    14. Domain for 6ipk:
    15. Domain for 6ipl:
    16. Domain for 6ipm:
    17. Domain for 6ipn:
    18. Domain for 7of0:
  4. 3007391Mouse (Mus musculus) [TaxId:10090] [255238] (1 PDB entry)
  5. 3007394Staphylococcus aureus [TaxId:1280] [350555] (4 PDB entries)
    1. Domains for 6ewz:
      1. 3007395Domain d6ewza_: 6ewz A: [411110]
        automated match to d6ewzb_
        complexed with apc, fe, gtp, mg
      2. 3007396Domain d6ewzb_: 6ewz B: [350611]
        automated match to d5f2vq_
        complexed with apc, fe, gtp, mg
    2. Domains for 6ex0:
      1. 3007399Domain d6ex0a_: 6ex0 A: [350809]
        automated match to d5f2vq_
        complexed with c1z, fe2
      2. 3007400Domain d6ex0b_: 6ex0 B: [350783]
        automated match to d5f2vq_
        complexed with c1z, fe2
    3. Domains for 6fgj:
      1. 3007397Domain d6fgja_: 6fgj A: [350589]
        automated match to d5f2vq_
        complexed with pge
      2. 3007398Domain d6fgjb_: 6fgj B: [350590]
        automated match to d5f2vq_
        complexed with pge
    4. Domains for 6fgx:
      1. 3007401Domain d6fgxa_: 6fgx A: [350653]
        automated match to d5f2vq_
        complexed with apc, mg
      2. 3007402Domain d6fgxb_: 6fgx B: [350556]
        automated match to d5f2vq_
        complexed with apc, mg
  6. 3007403Zymomonas mobilis [TaxId:264203] [256125] (1 PDB entry)

More info for Protein automated matches from d.218.1.0: automated matches

Timeline for Protein automated matches from d.218.1.0: automated matches: