SCOPe 2.08: Domain d6hvrj_: 6hvr J:

Lineage for d6hvrj_ (6hvr J:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome beta subunit (catalytic) [56252] (7 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (202 PDB entries)
   The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)

8. Domain d6hvrj_: 6hvr J: [363825]
   Other proteins in same PDB: d6hvra_, d6hvrc1, d6hvrc2, d6hvrd_, d6hvre_, d6hvrf_, d6hvrg_, d6hvrh_, d6hvrm_, d6hvro_, d6hvrp_, d6hvrq1, d6hvrq2, d6hvrr_, d6hvrs_, d6hvrt_, d6hvru_, d6hvrv_
   automated match to d1rypk_
   complexed with cl, grw, mg

Details for d6hvrj_

PDB Entry: 6hvr, 2.7 Å

PDB Description: yeast 20s proteasome with human beta2i (1-53) in complex with 16

PDB Compounds: (J:) Proteasome subunit beta type-4

SCOPe Domain Sequences for d6hvrj_:

Sequence; same for both SEQRES and ATOM records:

>d6hvrj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mdiilgirvqdsvilasskavtrgisvlkdsddktrqlsphtlmsfageagdtvqfaeyi
qaniqlysiredyelspqavssfvrqelaksirsrrpyqvnvliggydkkknkpelyqid
ylgtkvelpygahgysgfytfslldhhyrpdmtteegldllklcvqelekrmpmdfkgvi
vkivdkdgirqvddf

Timeline for d6hvrj_:

• d6hvrj_ first appeared in SCOPe 2.07