SCOPe 2.08: Domain d5z18b3: 5z18 B:279-597

Lineage for d5z18b3 (5z18 B:279-597)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Ruminococcus gnavus [TaxId:33038] [361249] (8 PDB entries)

8. Domain d5z18b3: 5z18 B:279-597 [361324]
   Other proteins in same PDB: d5z18a1, d5z18a2, d5z18b1, d5z18b2, d5z18c1, d5z18c2, d5z18d1, d5z18d2, d5z18e1, d5z18e2, d5z18f1, d5z18f2
   automated match to d5c70a3

Details for d5z18b3

PDB Entry: 5z18, 2.5 Å

PDB Description: the crystal structure of ruminococcus gnavus beta-glucuronidase

PDB Compounds: (B:) beta-glucuronidase

SCOPe Domain Sequences for d5z18b3:

Sequence, based on SEQRES records:

>d5z18b3 c.1.8.0 (B:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmrstrnfvaagsgnytyffealtvpellkshiadte
emitrdknhpsviawslfnepetitdyayeyfkevfaaaetydfqsrpmtgafeknskpe
lckcyplcdficlnryygwyisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtm
aglhklpsimwseeyqkeylemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgv
ftrdrqpkaaavvfkdrwe

Sequence, based on observed residues (ATOM records):

>d5z18b3 c.1.8.0 (B:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmrstytyffealtvpellkshiadteemitrdknhp
sviawslfnepetitdyayeyfkevfaaaetydfqsrpmtgafeknskpelckcyplcdf
iclnryygwyisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtmaglhklpsim
wseeyqkeylemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgvftrdrqpkaa
avvfkdrwe

Timeline for d5z18b3:

• d5z18b3 first appeared in SCOPe 2.07