Lineage for d5o44b_ (5o44 B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931514Protein Ubiquitin [54238] (9 species)
  7. 2931628Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2932206Domain d5o44b_: 5o44 B: [341277]
    Other proteins in same PDB: d5o44a_, d5o44e_
    automated match to d4bbnf_
    complexed with mg, so4

Details for d5o44b_

PDB Entry: 5o44 (more details), 3.14 Å

PDB Description: crystal structure of unbranched mixed tri-ubiquitin chain containing k48 and k63 linkages.
PDB Compounds: (B:) Polyubiquitin-B

SCOPe Domain Sequences for d5o44b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5o44b_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

SCOPe Domain Coordinates for d5o44b_:

Click to download the PDB-style file with coordinates for d5o44b_.
(The format of our PDB-style files is described here.)

Timeline for d5o44b_: