SCOP 1.61: Domain d1qs4c_: 1qs4 C:

Lineage for d1qs4c_ (1qs4 C:)

1. Root: SCOP 1.61

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)

4. Superfamily c.55.3: Ribonuclease H-like [53098] (7 families)

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (1 protein)

6. Protein Retroviral integrase, catalytic domain [53108] (3 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (17 PDB entries)

8. Domain d1qs4c_: 1qs4 C: [33660]

Details for d1qs4c_

PDB Entry: 1qs4, 2.1 Å

PDB Description: core domain of hiv-1 integrase complexed with mg++ and 1-(5- chloroindol-3-yl)-3-hydroxy-3-(2h-tetrazol-5-yl)-propenone

SCOP Domain Sequences for d1qs4c_:

Sequence, based on SEQRES records:

>d1qs4c_ c.55.3.2 (C:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1}
cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacewggikqefgipynpqsqgviesmnkelkkiigqvrdqaehlkta
vqmavfihnkkrkggiggysagerivdiiatdiq

Sequence, based on observed residues (ATOM records):

>d1qs4c_ c.55.3.2 (C:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1}
cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacewggikqefgnpqsqgviesmnkelkkiigqvrdqaehlktavqm
avfihnkkrkggiggysagerivdiiatdiq

Timeline for d1qs4c_:

• d1qs4c_ first appeared (with stable ids) in SCOP 1.55
  
• d1qs4c_ appears in SCOP 1.59
  
• d1qs4c_ appears in SCOP 1.63
  
• d1qs4c_ appears in the current release, SCOPe 2.08