Statistics

SCOP 1.61 statistics:
17411 PDB entries (released/updated prior to 2002-09-01). 44327 Domains. 23 Literature references.

Class Number of folds Number of superfamilies Number of families
a: All alpha proteins 151 257 409
b: All beta proteins 111 213 362
c: Alpha and beta proteins (a/b) 117 190 467
d: Alpha and beta proteins (a+b) 212 308 488
e: Multi-domain proteins (alpha and beta) 39 39 52
f: Membrane and cell surface proteins and peptides 12 19 34
g: Small proteins 59 84 128
Totals701 (18 new) 1110 (43 new) 1940 (116 new)

All SCOP and SCOPe Releases based on Stable Identifiers

SCOP Releases Prior to Stable Identifiers

  • SCOP 1.53 (Sep 2000)
  • SCOP 1.50 (Apr 2000)
  • SCOP 1.48 (Dec 1999)

History

All changes between releases SCOP 1.59 and SCOP 1.61:

Changes in SCOP 1.61 of type Obsolete reference:

  1. Species Flesh fly (Sarcophaga peregrina) [57169] from g.3.7.4 Sapecinobsolete
  2. ds059_1: s059 55-94 [44174] → obsolete

Changes in SCOP 1.61 of type Obsolete PDB:

  1. d1fumb1: 1fum B:106-243 [15677] → obsolete
  2. d1fumn1: 1fum N:106-243 [15678] → obsolete
  3. d1bera1: 1ber A:138-207 [16094] → obsolete
  4. d1berb1: 1ber B:138-205 [16095] → obsolete
  5. d1fjfr_: 1fjf R: [16251] → obsolete
  6. d1fjfm_: 1fjf M: [16292] → obsolete
  7. d1fuma1: 1fum A:443-575 [16326] → obsolete
  8. d1fumm1: 1fum M:443-575 [16327] → obsolete
  9. d1fjft_: 1fjf T: [16337] → obsolete
  10. d1fjfo_: 1fjf O: [16387] → obsolete
  11. d1imy__: 1imy - [16942] → obsolete
  12. d1imz__: 1imz - [16943] → obsolete
  13. d1fjfg_: 1fjf G: [18393] → obsolete
  14. d1fe7a_: 1fe7 A: [59781] → obsolete
  15. d1fe7b_: 1fe7 B: [59782] → obsolete
  16. d1c9rh1: 1c9r H:1-123 [20277] → obsolete
  17. d1c9rl1: 1c9r L:1-107 [20276] → obsolete
  18. d1c9rh2: 1c9r H:124-220 [21277] → obsolete
  19. d1c9rl2: 1c9r L:108-214 [21276] → obsolete
  20. d1i0ya_: 1i0y A: [22872] → obsolete
  21. d1i0wa_: 1i0w A: [22873] → obsolete
  22. d1fjfl_: 1fjf L: [25345] → obsolete
  23. d1fjfq_: 1fjf Q: [25351] → obsolete
  24. d1j8ja_: 1j8j A: [62741] → obsolete
  25. d1bera2: 1ber A:9-137 [28133] → obsolete
  26. d1berb2: 1ber B:9-137 [28134] → obsolete
  27. d1hf5a_: 1hf5 A: [65824] → obsolete
  28. d1hf7a_: 1hf7 A: [65826] → obsolete
  29. d1fxma_: 1fxm A: [60105] → obsolete
  30. d1taxa_: 1tax A: [28906] → obsolete
  31. d1tixa_: 1tix A: [28908] → obsolete
  32. d1bura1: 1bur A:148-475 [29335] → obsolete
  33. d1burb1: 1bur B:148-475 [29336] → obsolete
  34. d1burc1: 1bur C:148-475 [29337] → obsolete
  35. d1burd1: 1bur D:148-475 [29338] → obsolete
  36. d1b3ma1: 1b3m A:1-217,A:322-385 [30379] → obsolete
  37. d1b3mb1: 1b3m B:1-217,B:322-385 [30380] → obsolete
  38. d1fuma2: 1fum A:1-225,A:358-442 [30425] → obsolete
  39. d1fumm2: 1fum M:1-225,M:358-442 [30426] → obsolete
  40. d1b8ba_: 1b8b A: [30701] → obsolete
  41. d1fjfb_: 1fjf B: [31399] → obsolete
  42. d1c9ra1: 1c9r A:430-558 [33620] → obsolete
  43. d1fjfk_: 1fjf K: [33732] → obsolete
  44. d1kusa_: 1kus A: [68872] → obsolete
  45. d1dgya_: 1dgy A: [34937] → obsolete
  46. d1dh1a_: 1dh1 A: [34938] → obsolete
  47. d1dh0a_: 1dh0 A: [34939] → obsolete
  48. d1dh2a_: 1dh2 A: [34940] → obsolete
  49. d1fjfe1: 1fjf E:74-154 [37552] → obsolete
  50. d1fjfi_: 1fjf I: [37558] → obsolete
  51. d1fumb2: 1fum B:1-105 [37705] → obsolete
  52. d1fumn2: 1fum N:1-105 [37706] → obsolete
  53. d1b3ma2: 1b3m A:218-321 [37947] → obsolete
  54. d1b3mb2: 1b3m B:218-321 [37948] → obsolete
  55. d1fjfp_: 1fjf P: [38443] → obsolete
  56. d1fjfs_: 1fjf S: [38450] → obsolete
  57. d1fjfe2: 1fjf E:5-73 [38788] → obsolete
  58. d1fjfc1: 1fjf C:2-106 [38830] → obsolete
  59. d1fjfc2: 1fjf C:107-207 [38838] → obsolete
  60. d1hp6c_: 1hp6 C: [61115] → obsolete
  61. d1hp6f_: 1hp6 F: [61116] → obsolete
  62. d1bura2: 1bur A:12-147 [39241] → obsolete
  63. d1burb2: 1bur B:12-147 [39242] → obsolete
  64. d1burc2: 1bur C:12-147 [39243] → obsolete
  65. d1burd2: 1bur D:12-147 [39244] → obsolete
  66. d1fjff_: 1fjf F: [39315] → obsolete
  67. d1fjfj_: 1fjf J: [39329] → obsolete
  68. d1fjfd_: 1fjf D: [39552] → obsolete
  69. d1burs_: 1bur S: [39625] → obsolete
  70. d1burt_: 1bur T: [39626] → obsolete
  71. d1buru_: 1bur U: [39627] → obsolete
  72. d1burv_: 1bur V: [39628] → obsolete
  73. d1dlxa_: 1dlx A: [40022] → obsolete
  74. d1fqha_: 1fqh A: [40309] → obsolete
  75. d1fjfh_: 1fjf H: [41467] → obsolete
  76. d1a6o__: 1a6o - [41666] → obsolete
  77. d1fuma3: 1fum A:226-357 [42308] → obsolete
  78. d1fumm3: 1fum M:226-357 [42309] → obsolete
  79. d1jfeb1: 1jfe B:200-464 [66627] → obsolete
  80. d1jfee1: 1jfe E:200-463 [66632] → obsolete
  81. d1jfec1: 1jfe C:142-393 [66629] → obsolete
  82. d1jfef1: 1jfe F:142-393 [66634] → obsolete
  83. d2cae__: 2cae - [42810] → obsolete
  84. d1c9ra2: 1c9r A:1-429 [43108] → obsolete
  85. d1c9rb1: 1c9r B: [43109] → obsolete
  86. d1j7fa_: 1j7f A: [62682] → obsolete
  87. d1j7fb_: 1j7f B: [62683] → obsolete
  88. d1j7fc_: 1j7f C: [62684] → obsolete
  89. d1j7fd_: 1j7f D: [62685] → obsolete
  90. d1j7fe_: 1j7f E: [62686] → obsolete
  91. d1j7ff_: 1j7f F: [62687] → obsolete
  92. d1j7fg_: 1j7f G: [62688] → obsolete
  93. d1j7fh_: 1j7f H: [62689] → obsolete
  94. d1j7fi_: 1j7f I: [62690] → obsolete
  95. d1j7fj_: 1j7f J: [62691] → obsolete
  96. d1j7fk_: 1j7f K: [62692] → obsolete
  97. d1j7fl_: 1j7f L: [62693] → obsolete
  98. d1fumc_: 1fum C: [43718] → obsolete
  99. d1fumd_: 1fum D: [43719] → obsolete
  100. d1fumo_: 1fum O: [43720] → obsolete
  101. d1fump_: 1fum P: [43721] → obsolete
  102. d1fqua_: 1fqu A: [59991] → obsolete
  103. d1vks.1: 1vks B:,A: [43917] → obsolete
  104. d1fjfn_: 1fjf N: [45153] → obsolete
  105. d1jfea1: 1jfe A: [66626] → obsolete
  106. d1jfeb2: 1jfe B:65-199 [66628] → obsolete
  107. d1jfec2: 1jfe C:7-141 [66630] → obsolete
  108. d1jfed1: 1jfe D: [66631] → obsolete
  109. d1jfee2: 1jfe E:65-199 [66633] → obsolete
  110. d1jfef2: 1jfe F:7-141 [66635] → obsolete
  111. d1kpj0_: 1kpj 0: [68744] → obsolete
  112. d1kpj1_: 1kpj 1: [68745] → obsolete
  113. d1kpj2_: 1kpj 2: [68746] → obsolete
  114. d1kpj3_: 1kpj 3: [68747] → obsolete
  115. d1kpj4_: 1kpj 4: [68748] → obsolete
  116. d1kpj9_: 1kpj 9: [68749] → obsolete
  117. d1kpja_: 1kpj A: [68750] → obsolete
  118. d1kpjb_: 1kpj B: [68751] → obsolete
  119. d1kpjc_: 1kpj C: [68752] → obsolete
  120. d1kpjd_: 1kpj D: [68753] → obsolete
  121. d1kpje_: 1kpj E: [68754] → obsolete
  122. d1kpjf_: 1kpj F: [68755] → obsolete
  123. d1kpjg_: 1kpj G: [68756] → obsolete
  124. d1kpjh_: 1kpj H: [68757] → obsolete
  125. d1kpji_: 1kpj I: [68758] → obsolete
  126. d1kpjj_: 1kpj J: [68759] → obsolete
  127. d1kpjk_: 1kpj K: [68760] → obsolete
  128. d1kpjl_: 1kpj L: [68761] → obsolete
  129. d1kpjm_: 1kpj M: [68762] → obsolete
  130. d1kpjn_: 1kpj N: [68763] → obsolete
  131. d1kpjo_: 1kpj O: [68764] → obsolete
  132. d1kpjp_: 1kpj P: [68765] → obsolete
  133. d1kpjq_: 1kpj Q: [68766] → obsolete
  134. d1kpjr_: 1kpj R: [68767] → obsolete
  135. d1kpjs_: 1kpj S: [68768] → obsolete
  136. d1kpjt_: 1kpj T: [68769] → obsolete
  137. d1kpju_: 1kpj U: [68770] → obsolete
  138. d1kpjv_: 1kpj V: [68771] → obsolete
  139. d1kpjw_: 1kpj W: [68772] → obsolete
  140. d1kpjx_: 1kpj X: [68773] → obsolete
  141. d1kpjy_: 1kpj Y: [68774] → obsolete
  142. d1kpjz_: 1kpj Z: [68775] → obsolete
  143. d1k00a_: 1k00 A: [67896] → obsolete
  144. d1k00k_: 1k00 K: [67897] → obsolete
  145. d1k00l_: 1k00 L: [67898] → obsolete
  146. d1k00m_: 1k00 M: [67899] → obsolete
  147. d1fjfv_: 1fjf V: [46115] → obsolete
  148. d1k16a_: 1k16 A: [67991] → obsolete
  149. d1hrwa_: 1hrw A: [61230] → obsolete
  150. d1hrxa_: 1hrx A: [61231] → obsolete
  151. d1hs0a_: 1hs0 A: [61232] → obsolete

Changes in SCOP 1.61 of type Obsolete NOC:

  1. d0lpc_1: 0lpc 2-2 [19181] → obsolete
  2. d0lpc_2: 0lpc 1-1 [43823] → obsolete

Changes in SCOP 1.61 of type Merge:

  1. Fold a.82: FliG C-terminal domain [48028] →
    Fold a.118: alpha-alpha superhelix [48370]
  2. Fold d.69: C-terminal domain of TolA [55215] →
    Fold d.212: TolA/TonB C-terminal domain [74652]
  3. Fold d.191: Dimeric C-terminal domain of membrane protein TonB [64324] →
    Fold d.212: TolA/TonB C-terminal domain [74652]
  4. Superfamily a.82.1: FliG C-terminal domain [48029] →
    Superfamily a.118.14: FliG [48029]
  5. Superfamily b.30.1: beta-Galactosidase, domain 5 [49994] →
    Superfamily b.30.5: Galactose mutarotase-like [74650]
  6. Superfamily b.30.3: Hyaluronate lyase-like, central domain [50005] →
    Superfamily b.30.5: Galactose mutarotase-like [74650]
  7. Superfamily b.30.4: Lactobacillus maltose phosphorylase, N-terminal domain [63732] →
    Superfamily b.30.5: Galactose mutarotase-like [74650]
  8. Superfamily c.23.7: Ornithine decarboxylase N-terminal "wing" domain [52251] →
    Superfamily c.23.1: CheY-like [52172]
  9. Superfamily d.69.1: C-terminal domain of TolA [55216] →
    Superfamily d.212.1: TolA/TonB C-terminal domain [74653]
  10. Superfamily d.191.1: Dimeric C-terminal domain of membrane protein TonB [64325] →
    Superfamily d.212.1: TolA/TonB C-terminal domain [74653]
  11. Family a.4.3.2: MRF-2 DNA-binding domain [46778] →
    Family a.4.3.1: ARID domain [46775]
  12. Family a.82.1.1: FliG C-terminal domain [48030] →
    Family a.118.14.1: FliG [48030]
  13. Family b.30.1.1: beta-Galactosidase, domain 5 [49995] →
    Family b.30.5.1: beta-Galactosidase, domain 5 [49995]
  14. Family b.30.3.1: Hyaluronate lyase-like, central domain [50006] →
    Family b.30.5.2: Hyaluronate lyase-like, central domain [50006]
  15. Family b.30.4.1: Lactobacillus maltose phosphorylase, N-terminal domain [63733] →
    Family b.30.5.3: Lactobacillus maltose phosphorylase, N-terminal domain [63733]
  16. Family c.23.7.1: Ornithine decarboxylase N-terminal "wing" domain [52252] →
    Family c.23.1.4: Ornithine decarboxylase N-terminal "wing" domain [52252]
  17. Family d.69.1.1: C-terminal domain of TolA [55217] →
    Family d.212.1.1: TolA [55217]
  18. Family d.191.1.1: Dimeric C-terminal domain of membrane protein TonB [64326] →
    Family d.212.1.2: TonB [64326]
  19. Protein beta2-bungarotoxin, phospholipase A2 chain [48641] from a.133.1.2: Vertebrate phospholipase A2
    Protein Snake phospholipase A2 [48624] from a.133.1.2: Vertebrate phospholipase A2
  20. Protein Myotoxin II [48643] from a.133.1.2: Vertebrate phospholipase A2
    Protein Snake phospholipase A2 [48624] from a.133.1.2: Vertebrate phospholipase A2
  21. Protein P-30 protein [54082] from d.5.1.1: Ribonuclease A-like
    Protein Amphibian cytotoxic ribonuclease [54084] from d.5.1.1: Ribonuclease A-like
  22. Protein HP1 homologue SWI6 [54168] from d.9.2.2: Chromo domain
    Protein Heterochromatin protein 1, HP1 [54166] from d.9.2.2: Chromo domain
  23. Protein Ferredoxin VI [64229] from d.15.4.1: 2Fe-2S ferredoxin-related
    Protein 2Fe-2S ferredoxin [54294] from d.15.4.1: 2Fe-2S ferredoxin-related
  24. Protein Putidaredoxin [54306] from d.15.4.1: 2Fe-2S ferredoxin-related
    Protein 2Fe-2S ferredoxin [54294] from d.15.4.1: 2Fe-2S ferredoxin-related
  25. Protein Terpredoxin [54308] from d.15.4.1: 2Fe-2S ferredoxin-related
    Protein 2Fe-2S ferredoxin [54294] from d.15.4.1: 2Fe-2S ferredoxin-related
  26. Protein Sapecin [57168] from g.3.7.4: Insect defensins
    Protein Defensin A [57166] from g.3.7.4: Insect defensins
  27. d1jhna1: 1jhn A:61-262 [66720] →
    d1jhna4: 1jhn A:61-262,A:412-458 [70060]
  28. d1jhna2: 1jhn A:412-458 [66721] →
    d1jhna4: 1jhn A:61-262,A:412-458 [70060]

Changes in SCOP 1.61 of type Split:

  1. Family c.63.1.1: Glutaconate-CoA transferase subunits [53317] →
    Family c.63.1.2: alpha subunit-like [74656], Family c.63.1.3: beta subunit-like [74657]
  2. Species Mouse (Mus musculus) [TaxId:10090] [69245] from b.34.2.1 c-src tyrosine kinase
    Species Mouse (Mus musculus) [TaxId:10090] [74655] from b.34.2.1 Carboxyl-terminal src kinase (csk)

Changes in SCOP 1.61 of type Move:

  1. Superfamily a.118.2: Ankyrin repeat [48403] →
    Superfamily d.211.1: Ankyrin repeat [48403]
  2. Family a.118.2.1: Ankyrin repeat [48404] →
    Family d.211.1.1: Ankyrin repeat [48404]
  3. Family g.41.9.1: RBP9 subunit of RNA polymerase II [63394] →
    Family g.41.3.1: Transcriptional factor domain [57784]
  4. Protein v-src tyrosine kinase [55554] from d.93.1.1: SH2 domain
    Protein c-src tyrosine kinase [55556] from d.93.1.1: SH2 domain
  5. Protein Plasminogen kringle domains [57446] from g.14.1.1: Kringle modules
    Protein Plasminogen [63400] from g.14.1.1: Kringle modules
  6. Species Rous sarcoma virus, Schmidt-ruppin strain a [55555] from d.93.1.1 v-src tyrosine kinase
    Species Rous sarcoma virus [TaxId:11886] [69782] from d.93.1.1 c-src tyrosine kinase
  7. Species Human (Homo sapiens) [TaxId:9606] [57447] from g.14.1.1 Plasminogen kringle domains
    Species Human (Homo sapiens) [TaxId:9606] [63401] from g.14.1.1 Plasminogen