SCOPe 2.02: Domain d1buab_: 1bua B:

Lineage for d1buab_ (1bua B:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (34 families)

5. Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)

6. Protein Restriction endonuclease EcoRV [52985] (1 species)

7. Species Escherichia coli [TaxId:562] [52986] (29 PDB entries)

8. Domain d1buab_: 1bua B: [33267]
   protein/DNA complex

Details for d1buab_

PDB Entry: 1bua, 2.15 Å

PDB Description: structural and energetic origins of indirect readout in site-specific dna cleavage by a restriction endonuclease

PDB Compounds: (B:) endonuclease ecorv

SCOPe Domain Sequences for d1buab_:

Sequence, based on SEQRES records:

>d1buab_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgr

Sequence, based on observed residues (ATOM records):

>d1buab_ c.52.1.2 (B:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydedvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgyivee
pkqqnhypdftlykpsepnkkiaidikttytnkikftlggytsfirnntknivypfdqyi
ahwiigyvytrslktyninelneipkpykgvkvflqdkwviagdlagsgnttnigsihah
ykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgr

Timeline for d1buab_:

• d1buab_ first appeared (with stable ids) in SCOP 1.55
  
• d1buab_ appears in SCOPe 2.01
  
• d1buab_ appears in SCOPe 2.03
  
• d1buab_ appears in the current release, SCOPe 2.08