SCOPe 2.02: Domain d1bgba_: 1bgb A:

Lineage for d1bgba_ (1bgb A:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (34 families)

5. Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)

6. Protein Restriction endonuclease EcoRV [52985] (1 species)

7. Species Escherichia coli [TaxId:562] [52986] (29 PDB entries)

8. Domain d1bgba_: 1bgb A: [33254]
   protein/DNA complex

Details for d1bgba_

PDB Entry: 1bgb, 2 Å

PDB Description: ecorv endonuclease complex with 5'-cgggatatccc dna

PDB Compounds: (A:) ecorv endonuclease

SCOPe Domain Sequences for d1bgba_:

Sequence, based on SEQRES records:

>d1bgba_ c.52.1.2 (A:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgrk

Sequence, based on observed residues (ATOM records):

>d1bgba_ c.52.1.2 (A:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvktyninelneipkpykgvkvflqdkwviagdlagsgnttn
igsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiyrgrk

Timeline for d1bgba_:

• d1bgba_ first appeared (with stable ids) in SCOP 1.55
  
• d1bgba_ appears in SCOPe 2.01
  
• d1bgba_ appears in SCOPe 2.03
  
• d1bgba_ appears in the current release, SCOPe 2.08