SCOPe 2.07: Domain d1eo4a_: 1eo4 A:

Lineage for d1eo4a_ (1eo4 A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)

5. Family c.52.1.2: Restriction endonuclease EcoRV [52984] (1 protein)
   automatically mapped to Pfam PF09233

6. Protein Restriction endonuclease EcoRV [52985] (1 species)

7. Species Escherichia coli [TaxId:562] [52986] (30 PDB entries)

8. Domain d1eo4a_: 1eo4 A: [33246]
   protein/DNA complex; complexed with acy, mn

Details for d1eo4a_

PDB Entry: 1eo4, 1.9 Å

PDB Description: ecorv bound to mn2+ and cognate dna containing a 3's substition at the cleavage site

PDB Compounds: (A:) Type II restriction enzyme EcoRV

SCOPe Domain Sequences for d1eo4a_:

Sequence, based on SEQRES records:

>d1eo4a_ c.52.1.2 (A:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvatrksslktyninelneipkpykgvkvflqdkwviagdla
gsgnttnigsihahykdfvegkgifdsedefldywrnyertsqlrndkynniseyrnwiy
rgrk

Sequence, based on observed residues (ATOM records):

>d1eo4a_ c.52.1.2 (A:) Restriction endonuclease EcoRV {Escherichia coli [TaxId: 562]}
slrsdlinalydenqkydvcgiisaegkiyplgsdtkvlstifelfsrpiinkiaekhgy
iveepkqqnhypdftlykpsepnkkiaidikttytnkenekikftlggytsfirnntkni
vypfdqyiahwiigyvytrvksslktynilneipkpykgvkvflqdkwviagdlagsgnt
tnigsihahykdfvegkgifdsedefldywrnyertsqrndkynniseyrnwiyrgrk

Timeline for d1eo4a_:

• d1eo4a_ first appeared (with stable ids) in SCOP 1.55
  
• d1eo4a_ appears in SCOPe 2.06
  
• d1eo4a_ appears in the current release, SCOPe 2.08