SCOPe 2.08: Domain d5hqlf2: 5hql F:139-455

Lineage for d5hqlf2 (5hql F:139-455)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein automated matches [226984] (16 species)
   not a true protein

7. Species Rhodopseudomonas palustris [TaxId:1] [328884] (1 PDB entry)

8. Domain d5hqlf2: 5hql F:139-455 [328967]
   Other proteins in same PDB: d5hqla1, d5hqlb1, d5hqlc1, d5hqld1, d5hqle1, d5hqlf1
   automated match to d4lf2a2
   complexed with cap, mg; mutant

Details for d5hqlf2

PDB Entry: 5hql, 2.53 Å

PDB Description: structure function studies of r. palustris rubisco (a47v-m331a mutant; cabp-bound; no expression tag)

PDB Compounds: (F:) Ribulose bisphosphate carboxylase

SCOPe Domain Sequences for d5hqlf2:

Sequence, based on SEQRES records:

>d5hqlf2 c.1.14.1 (F:139-455) automated matches {Rhodopseudomonas palustris [TaxId: 1]}
gpsttikdlwrvlgrpvinggfivgtiikpklglrpqpfanacydfwlggdfikndepqg
nqvfapfkdtvravadamrraqdktgeaklfsfnitaddhyemlargefiletfadnadh
iaflvdgyvagpaavttarrafpkqylhyhraghgavtspqskrgytafvlskmarlqga
sgihtgtmgfgkaegeaadraiaymitedaadgpyfhqewlgmnpttpiisggmnalrmp
gffdnlghsnlimtagggafghvdggaagakslrqaeqcwkqgadpvefakdhrefaraf
esfpqdadklypnwrak

Sequence, based on observed residues (ATOM records):

>d5hqlf2 c.1.14.1 (F:139-455) automated matches {Rhodopseudomonas palustris [TaxId: 1]}
gpsttikdlwrvlgrpvinggfivgtiikpklglrpqpfanacydfwlggdfikndepqg
nqvfapfkdtvravadamrraqdktgeaklfsfnitaddhyemlargefiletfadnadh
iaflvdgyvagpaavttarrafpkqylhyhraghgavtspqskrgytafvlskmarlqga
sgihtgtmgfgkaegeaadraiaymitedaadgpyfhqewlgmnpttpiisggmnalrmp
gffdnlghsnlimtagggafghvdggaagakslrqaeqcwkqgadpvefadhrefarafe
sfpqdadklypnwrak

Timeline for d5hqlf2:

• d5hqlf2 first appeared in SCOPe 2.06
  
• d5hqlf2 appears in SCOPe 2.07