Lineage for d5iyzf2 (5iyz F:77-378)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978525Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2978526Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2978888Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2978889Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2978890Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)
  8. 2978899Domain d5iyzf2: 5iyz F:77-378 [321434]
    Other proteins in same PDB: d5iyza1, d5iyza2, d5iyzb1, d5iyzb2, d5iyzc1, d5iyzc2, d5iyzd1, d5iyzd2, d5iyze_, d5iyzf1, d5iyzf3
    automated match to d3tiia2
    complexed with 4q5, acp, ca, gdp, gtp, mes, mg

Details for d5iyzf2

PDB Entry: 5iyz (more details), 1.8 Å

PDB Description: tubulin-mmae complex
PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5iyzf2:

Sequence, based on SEQRES records: (download)

>d5iyzf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d5iyzf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrreggnvwiaksgilisseas
elldfidevhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepyns
atchltnhciqkeysknygryeegnemffeefnqylmdalnttlensillqikhiirscl
mciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdvai
ssvfplasifikl

SCOPe Domain Coordinates for d5iyzf2:

Click to download the PDB-style file with coordinates for d5iyzf2.
(The format of our PDB-style files is described here.)

Timeline for d5iyzf2: