Lineage for d5k59b_ (5k59 B:)

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2251912Fold f.6: Leukocidin-like [56958] (1 superfamily)
    subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
  4. 2251913Superfamily f.6.1: Leukocidin-like [56959] (3 families) (S)
  5. 2252040Family f.6.1.0: automated matches [227293] (1 protein)
    not a true family
  6. 2252041Protein automated matches [227114] (5 species)
    not a true protein
  7. 2252054Species Staphylococcus aureus [TaxId:367830] [321099] (1 PDB entry)
  8. 2252056Domain d5k59b_: 5k59 B: [321208]
    Other proteins in same PDB: d5k59f1, d5k59f2, d5k59l1, d5k59l2
    automated match to d3lkfa_
    complexed with cl, pg4, po4

Details for d5k59b_

PDB Entry: 5k59 (more details), 2.84 Å

PDB Description: crystal structure of lukgh from staphylococcus aureus in complex with a neutralising antibody
PDB Compounds: (B:) Uncharacterized leukocidin-like protein 1

SCOPe Domain Sequences for d5k59b_:

Sequence, based on SEQRES records: (download)

>d5k59b_ f.6.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 367830]}
eknldgdtkmytrtattsdsqknitqslqfnfltepnydketvfikakgtigsglrildp
ngywnstlrwpgsysvsiqnvddnnntnvtdfapknqdesrevkytygyktggdfsinrg
gltgnitkesnysetisyqqpsyrtlldqstshkgvgwkveahlinnmghdhtrqltnds
dnrtkseifsltrngnlwakdnftpkdkmpvtvsegfnpeflavmshdkkdkgksqfvvh
ykrsmdefkidwnrhgfwgywsgenhvdkkeeklsalyevdwkthnvkfvkvlnd

Sequence, based on observed residues (ATOM records): (download)

>d5k59b_ f.6.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 367830]}
eknldgdtkmytrtattsdsqknitqslqfnfltepnydketvfikakgtigsglrildp
ngywnstlrwpgsysvsiqnvddnnntnvtdfapknqdesrevkytygyktggdfsingl
tgnitkesnysetisyqqpsyrtlldqstshkgvgwkveahlinnmghdhtrqltndsdn
rtkseifsltrngnlwakdnftpkdkmpvtvsegfnpeflavmshdkkdkgksqfvvhyk
rsmdefkidwnrhgfwgywsgenhvdkkeeklsalyevdwkthnvkfvkvlnd

SCOPe Domain Coordinates for d5k59b_:

Click to download the PDB-style file with coordinates for d5k59b_.
(The format of our PDB-style files is described here.)

Timeline for d5k59b_: