Lineage for d5e6yb2 (5e6y B:227-622)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2089714Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2093018Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2093019Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2093517Protein automated matches [190099] (25 species)
    not a true protein
  7. 2093550Species Escherichia coli [TaxId:331111] [311496] (3 PDB entries)
  8. 2093560Domain d5e6yb2: 5e6y B:227-622 [310449]
    Other proteins in same PDB: d5e6ya1, d5e6ya3, d5e6yb1, d5e6yb3, d5e6yc1, d5e6yc3, d5e6yd1, d5e6yd3
    automated match to d1m7xa3
    complexed with acx, gol

Details for d5e6yb2

PDB Entry: 5e6y (more details), 2.6 Å

PDB Description: crystal structure of e.coli branching enzyme in complex with alpha cyclodextrin
PDB Compounds: (B:) 1,4-alpha-glucan branching enzyme GlgB

SCOPe Domain Sequences for d5e6yb2:

Sequence, based on SEQRES records: (download)

>d5e6yb2 c.1.8.1 (B:227-622) automated matches {Escherichia coli [TaxId: 331111]}
vvqteerkkanqfdapisiyevhlgswrrhtdnnfwlsyreladqlvpyakwmgfthlel
lpinehpfdgswgyqptglyaptrrfgtrddfryfidaahaaglnvildwvpghfptddf
alaefdgtnlyehsdpregyhqdwntliynygrrevsnflvgnalywierfgidalrvda
vasmiyrdysrkegewipnefggrenleaieflrntnrilgeqvsgavtmaeestdfpgv
srpqdmgglgfwykwnlgwmhdtldymkldpvyrqyhhdkltfgilynytenfvlplshd
evvhgkksildrmpgdawqkfanlrayygwmwafpgkkllfmgnefaqgrewnhdasldw
hlleggdnwhhgvqrlvrdlnltyrhhkamheldfd

Sequence, based on observed residues (ATOM records): (download)

>d5e6yb2 c.1.8.1 (B:227-622) automated matches {Escherichia coli [TaxId: 331111]}
vvqteerkkanqfdapisiyevhlgswrrhtdnnfwlsyreladqlvpyakwmgfthlel
lpinehpfdgswgyqptglyaptrrfgtrddfryfidaahaaglnvildwvpghfptddf
alaefdgtnlyehstliynygrrevsnflvgnalywierfgidalrvdavasmiyrdyip
nefggrenleaieflrntnrilgeqvsgavtmaeestdfpgvsrpqdmgglgfwykwnlg
wmhdtldymkldpvyrqyhhdkltfgilynytenfvlplshdevvhgkksildrmpgdaw
qkfanlrayygwmwafpgkkllfmgnefaqgrewnhdasldwhlleggdnwhhgvqrlvr
dlnltyrhhkamheldfd

SCOPe Domain Coordinates for d5e6yb2:

Click to download the PDB-style file with coordinates for d5e6yb2.
(The format of our PDB-style files is described here.)

Timeline for d5e6yb2: