SCOPe 2.07: Domain d3tiib2: 3tii B:77-377

Lineage for d3tiib2 (3tii B:77-377)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Western clawed frog (Xenopus tropicalis) [TaxId:8364] [310977] (3 PDB entries)

8. Domain d3tiib2: 3tii B:77-377 [306554]
   Other proteins in same PDB: d3tiia1, d3tiia3, d3tiib1, d3tiib3
   complexed with anp, mg

Details for d3tiib2

PDB Entry: 3tii, 2.5 Å

PDB Description: Tubulin tyrosine ligase

PDB Compounds: (B:) Ttl protein

SCOPe Domain Sequences for d3tiib2:

Sequence, based on SEQRES records:

>d3tiib2 d.142.1.10 (B:77-377) Tubulin tyrosine ligase (TTL) C-terminal domain {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}
lvkliktspeltetctwfpesyviyptnektpamrarnglpdlanaprtdereefrssfn
kkkeneegnvwiaksssgakgegilissdatelldfidnqgqvhviqkylesplllepgh
rkfdirswvlvdnqyniylyregvlrtssepysdtnfqdmtshltnhciqkehsknygry
eegnemffeefnqylvtslninlensilcqikeiirvclsclepaistkylpyhsfqlfg
fdfmvdknlkvwlievngapacaqklyaelckgivdlaissvfplneenhkptednvfik
l

Sequence, based on observed residues (ATOM records):

>d3tiib2 d.142.1.10 (B:77-377) Tubulin tyrosine ligase (TTL) C-terminal domain {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}
lvkliktspeltetctwfpesyviypdereefrssfnkkkeneegnvwiaksssegilis
sdatelldfidnqgqvhviqkylesplllepghrkfdirswvlvdnqyniylyregvlrt
ssepynemffeefnqylvtslninlensilcqikeiirvclsclepaistkylpyhsfql
fgfdfmvdknlkvwlievngapacaqklyaelckgivdlaissvfplnnvfikl

Timeline for d3tiib2:

• d3tiib2 first appeared in SCOPe 2.06
  
• d3tiib2 appears in the current release, SCOPe 2.08