Lineage for d2fvib_ (2fvi B:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2337561Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2337562Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2337563Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)
  6. 2337579Protein Geranylgeranyl pyrophosphate synthetase [158813] (1 species)
  7. 2337580Species Human (Homo sapiens) [TaxId:9606] [158814] (4 PDB entries)
    Uniprot O95749 6-296
  8. 2337588Domain d2fvib_: 2fvi B: [303895]
    automated match to d2q80a1
    complexed with grg, mg

Details for d2fvib_

PDB Entry: 2fvi (more details), 2.7 Å

PDB Description: Crystal structure of human geranylgeranyl pyrophosphate synthase bound to GGPP
PDB Compounds: (B:) Geranylgeranyl pyrophosphate synthetase

SCOPe Domain Sequences for d2fvib_:

Sequence, based on SEQRES records: (download)

>d2fvib_ a.128.1.1 (B:) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
etvqrillepykyllqlpgkqvrtklsqafnhwlkvpedklqiiievtemlhnasllidd
iednsklrrgfpvahsiygipsvinsanyvyflglekvltldhpdavklftrqllelhqg
qgldiywrdnytcpteeeykamvlqktgglfglavglmqlfsdykedlkpllntlglffq
irddyanlhskeysenksfcedltegkfsfptihaiwsrpestqvqnilrqrtenidikk
ycvhyledvgsfeytrntlkeleakaykqidarggnpelvalvkhlskmf

Sequence, based on observed residues (ATOM records): (download)

>d2fvib_ a.128.1.1 (B:) Geranylgeranyl pyrophosphate synthetase {Human (Homo sapiens) [TaxId: 9606]}
etvqrillepykyllqlpgkqvrtklsqafnhwlkvpedklqiiievtemlhnasllidd
iednsklrrgfpvahsiygipsvinsanyvyflglekvltldhpdavklftrqllelhqg
qgldiywrdnytcpteeeykamvlqktgglfglavglmqlfsdykedlkpllntlglffq
irddyanlhsksfcedltegkfsfptihaiwsrpestqvqnilrqrtenidikkycvhyl
edvgsfeytrntlkeleakaykqidarggnpelvalvkhlskmf

SCOPe Domain Coordinates for d2fvib_:

Click to download the PDB-style file with coordinates for d2fvib_.
(The format of our PDB-style files is described here.)

Timeline for d2fvib_: