Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) |
Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins) members of the family may contain various insert subdomains in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain |
Protein Plant alpha-amylase [51474] (2 species) |
Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51475] (3 PDB entries) |
Domain d1avaa2: 1ava A:1-346 [28784] Other proteins in same PDB: d1avaa1, d1avab1, d1avac_, d1avad_ complexed with ca |
PDB Entry: 1ava (more details), 1.9 Å
SCOPe Domain Sequences for d1avaa2:
Sequence; same for both SEQRES and ATOM records: (download)
>d1avaa2 c.1.8.1 (A:1-346) Plant alpha-amylase {Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]} qvlfqgfnweswkhnggwynflmgkvddiaaagithvwlppasqsvaeqgympgrlydld askygnkaqlksligalhgkgvkaiadivinhrtaehkdgrgiycifeggtpdarldwgp hmicrddrpyadgtgnpdtgadfgaapdidhlnlrvqkelvewlnwlkadigfdgwrfdf akgysadvakiyidrsepsfavaeiwtslayggdgkpnlnqdqhrqelvnwvdkvggkgp attfdfttkgilnvavegelwrlrgtdgkapgmigwwpakavtfvdnhdtgstqhmwpfp sdrvmqgyayilthpgtpcifydhffdwglkeeidrlvsvrtrhgi
Timeline for d1avaa2:
View in 3D Domains from other chains: (mouse over for more information) d1avab1, d1avab2, d1avac_, d1avad_ |