Lineage for d5cgfr_ (5cgf R:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2988339Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2988340Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2988529Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2993312Protein automated matches [190144] (14 species)
    not a true protein
  7. 2993581Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (202 PDB entries)
  8. 2994636Domain d5cgfr_: 5cgf R: [279564]
    Other proteins in same PDB: d5cgfa_, d5cgfc2, d5cgfe_, d5cgff_, d5cgfi_, d5cgfj_, d5cgfk_, d5cgfl_, d5cgfn_, d5cgfo_, d5cgfq2, d5cgfs_, d5cgft_, d5cgfw_, d5cgfx_, d5cgfy_, d5cgfz_
    automated match to d1rype_
    complexed with cl, mg; mutant

Details for d5cgfr_

PDB Entry: 5cgf (more details), 2.8 Å

PDB Description: yeast 20s proteasome beta5-g48c mutant
PDB Compounds: (R:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d5cgfr_:

Sequence, based on SEQRES records: (download)

>d5cgfr_ d.153.1.4 (R:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records): (download)

>d5cgfr_ d.153.1.4 (R:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

SCOPe Domain Coordinates for d5cgfr_:

Click to download the PDB-style file with coordinates for d5cgfr_.
(The format of our PDB-style files is described here.)

Timeline for d5cgfr_: