SCOPe 2.04: Domain d4u2mb1: 4u2m B:-1-109

Lineage for d4u2mb1 (4u2m B:-1-109)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.42: POZ domain [54694] (1 superfamily)
   core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143

4. Superfamily d.42.1: POZ domain [54695] (3 families)

5. Family d.42.1.1: BTB/POZ domain [54696] (6 proteins)

6. Protein B-cell lymphoma 6 (Bcl6) protein BTB domain [102922] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [102923] (7 PDB entries)

8. Domain d4u2mb1: 4u2m B:-1-109 [261996]
   automated match to d1r2ba_

Details for d4u2mb1

PDB Entry: 4u2m, 2.23 Å

PDB Description: Crystal structure of a complex of the Miz1- and BCL6 POZ domains.

PDB Compounds: (B:) Zinc finger and BTB domain-containing protein 17,B-cell lymphoma 6 protein

SCOPe Domain Sequences for d4u2mb1:

Sequence, based on SEQRES records:

>d4u2mb1 d.42.1.1 (B:-1-109) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
lgsdfpqhsqhvleqlnqqrqlgllcdctfvvdgvhfkahkavlaacseyfkmlfvdqkd
vvhldisnaaglgqvlefmytaklslspenvddvlavatflqmqdiitach

Sequence, based on observed residues (ATOM records):

>d4u2mb1 d.42.1.1 (B:-1-109) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
lgsdfpqhsqhvleqlnqqrqlgllcdctfvvdgvhfkahkavlaacseyfkmlfvdqkv
hldisnaaglgqvlefmytaklslspenvddvlavatflqmqdiitach

Timeline for d4u2mb1:

• d4u2mb1 is new in SCOPe 2.04-stable
  
• d4u2mb1 appears in SCOPe 2.05
  
• d4u2mb1 appears in the current release, SCOPe 2.08