Lineage for d4rura_ (4rur A:)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1676433Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1676434Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1676603Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1677317Protein Proteasome beta subunit (catalytic) [56252] (5 species)
  7. 1677326Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (62 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 1677607Domain d4rura_: 4rur A: [261585]
    Other proteins in same PDB: d4rurb_, d4rurc_, d4rurd_, d4rure_, d4rurf_, d4rurg_, d4rurh_, d4rurm_, d4rurp_, d4rurq_, d4rurr_, d4rurs_, d4rurt_, d4ruru_
    automated match to d1jd2v_

Details for d4rura_

PDB Entry: 4rur (more details), 2.5 Å

PDB Description: yeast 20s proteasome in complex with the alkaloid indolo-phakellin (4)
PDB Compounds: (A:) Proteasome subunit alpha type-2

SCOPe Domain Sequences for d4rura_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4rura_ d.153.1.4 (A:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mtdrysfslttfspsgklgqidyaltavkqgvtslgikatngvviatekksssplamset
lskvslltpdigavysgmgpdyrvlvdksrkvahtsykriygeypptkllvsevakimqe
atqsggvrpfgvslliaghdefngfslyqvdpsgsyfpwkataigkgsvaaktflekrwn
deleledaihialltlkesvegefngdtielaiigdenpdllgytgiptdkgprfrklts
qeindrleal

SCOPe Domain Coordinates for d4rura_:

Click to download the PDB-style file with coordinates for d4rura_.
(The format of our PDB-style files is described here.)

Timeline for d4rura_: