SCOPe 2.04: Domain d4gome_: 4gom E:

Lineage for d4gome_ (4gom E:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (58 families)

5. Family c.66.1.28: N6 adenine-specific DNA methylase, DAM [88788] (3 proteins)
   automatically mapped to Pfam PF02086

6. Protein automated matches [237125] (1 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [237133] (5 PDB entries)

8. Domain d4gome_: 4gom E: [252247]
   automated match to d4gole_
   protein/DNA complex; complexed with 0y0

Details for d4gome_

PDB Entry: 4gom, 2.45 Å

PDB Description: Crystal Structure of E. coli DNA Adenine Methyltransferase in Complex with Aza-SAM

PDB Compounds: (E:) DNA adenine methylase

SCOPe Domain Sequences for d4gome_:

Sequence, based on SEQRES records:

>d4gome_ c.66.1.28 (E:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlisl
ynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygyngl
crynlrgefnvpfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddasvvycdp
pyaplsatanftayhtnsftleqqahlaeiaeglverhipvlisnhdtmltrewyqrakl
hvvkvrrsissnggtrkkvdellalykp

Sequence, based on observed residues (ATOM records):

>d4gome_ c.66.1.28 (E:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
knraflkwaggkypllddikrhlpkgeclvepfvgagsvflntdfsryiladinsdlisl
ynivkmrtdeyvqaarelfvpetncaevyyqfreefnksqdpfrravlflylnrygyngl
crynlrgefnvpfgrykkpyfpeaelyhfaekaqnaffycesyadsmaraddasvvycdp
pyaplsftleqqahlaeiaeglverhipvlisnhdtmltrewyqraklhvvkvkvdella
lykp

Timeline for d4gome_:

• d4gome_ is new in SCOPe 2.04-stable
  
• d4gome_ appears in SCOPe 2.05
  
• d4gome_ appears in the current release, SCOPe 2.08