SCOPe 2.04: Domain d2pzja_: 2pzj A:

Lineage for d2pzja_ (2pzj A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (181 species)
   not a true protein

7. Species Bordetella bronchiseptica [TaxId:518] [225344] (6 PDB entries)

8. Domain d2pzja_: 2pzj A: [243507]
   automated match to d1r6da_
   complexed with nad

Details for d2pzja_

PDB Entry: 2pzj, 1.9 Å

PDB Description: Crystal structure of the Bordetella bronchiseptica enzyme WbmF in complex with NAD+

PDB Compounds: (A:) Putative nucleotide sugar epimerase/ dehydratase

SCOPe Domain Sequences for d2pzja_:

Sequence, based on SEQRES records:

>d2pzja_ c.2.1.0 (A:) automated matches {Bordetella bronchiseptica [TaxId: 518]}
sklantnvmvvggagfvgsnlvkrllelgvnqvhvvdnllsaekinvpdhpavrfsetsi
tddallaslqdeydyvfhlatyhgnqssihdpladhenntlttlklyerlkhfkrlkkvv
ysaagcsiaektfddakateetdivslhnndspysmskifgefysvyyhkqhqlptvrar
fqnvygpgeilgagrwrgtpatvwrnvtptfiykalkgmplplenggvatrdfifvedva
ngliacaadgtpggvyniasgketsiadlatkineitgnnteldrlpkrpwdnsgkrfgs
pekarrelgfsadvsiddglrktiewtkanlavieqimrkhdsalaty

Sequence, based on observed residues (ATOM records):

>d2pzja_ c.2.1.0 (A:) automated matches {Bordetella bronchiseptica [TaxId: 518]}
sklantnvmvvggagfvgsnlvkrllelgvnqvhvvdnllsaekinvpdhpavrfsetsi
tddallaslqdeydyvfhlatyhgnqssihdpladhenntlttlklyerlkhfkrlkkvv
ysaageetdivslhnndspysmskifgefysvyyhkqhqlptvrarfqnvygpgeilgag
rwrgtpatvwrnvtptfiykalkgmplplenggvatrdfifvedvangliacaadgtpgg
vyniasgketsiadlatkineitgnnteldrlpkrpwdnsgspekarrelgfsadvsidd
glrktiewtkanlavieqimrkhdsalaty

Timeline for d2pzja_:

• d2pzja_ is new in SCOPe 2.04-stable
  
• d2pzja_ appears in SCOPe 2.05
  
• d2pzja_ appears in the current release, SCOPe 2.08