SCOPe 2.04: Domain d2issa_: 2iss A:

Lineage for d2issa_ (2iss A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.6: PdxS-like [141755] (2 proteins)
   Pfam PF01680; SOR/SNZ

6. Protein automated matches [193117] (4 species)
   not a true protein

7. Species Thermotoga maritima [TaxId:2336] [255244] (1 PDB entry)

8. Domain d2issa_: 2iss A: [238685]
   Other proteins in same PDB: d2issd_, d2isse_, d2issf_
   automated match to d2nv2i_
   complexed with 5rp, po4

Details for d2issa_

PDB Entry: 2iss, 2.9 Å

PDB Description: Structure of the PLP synthase Holoenzyme from Thermotoga maritima

PDB Compounds: (A:) Pyridoxal biosynthesis lyase pdxS

SCOPe Domain Sequences for d2issa_:

Sequence; same for both SEQRES and ATOM records:

>d2issa_ c.1.2.6 (A:) automated matches {Thermotoga maritima [TaxId: 2336]}
hmeikkgtwiikkgfaemfkggvimdvtsaeqakiaeeagavavmalervpadirkeggv
armasiakireimeavsipvmakvrighiaeakileelgvdfidesevltpaddrfhink
hefkvpfvcgardlgealrriaegaamirtkgeagtgnvveavkhmrrvmeqikqvtkme
deelvaygkeigapvellrevkrlgrlpvvnfaaggvatpadaalmmmlgadgvfvgsgi
fkskdprkmakamvlavtywdnprillkisedigepmrgld

Timeline for d2issa_:

• d2issa_ is new in SCOPe 2.04-stable
  
• d2issa_ appears in SCOPe 2.05
  
• d2issa_ appears in the current release, SCOPe 2.08, called d2issa1