SCOPe 2.05: Domain d1sovb1: 1sov B:15-163

Lineage for d1sovb1 (1sov B:15-163)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (203 species)
   not a true protein

7. Species Toxoplasma gondii [TaxId:5811] [230331] (2 PDB entries)

8. Domain d1sovb1: 1sov B:15-163 [230337]
   Other proteins in same PDB: d1sova2, d1sovb2
   automated match to d1pzga1

Details for d1sovb1

PDB Entry: 1sov, 1.9 Å

PDB Description: Toxoplasma gondii bradyzoite-specific LDH (LDH2) apo form

PDB Compounds: (B:) l-lactate dehydrogenase

SCOPe Domain Sequences for d1sovb1:

Sequence, based on SEQRES records:

>d1sovb1 c.2.1.0 (B:15-163) automated matches {Toxoplasma gondii [TaxId: 5811]}
gtvsrrkkiamigsgmiggtmgylcvlreladvvlfdvvtgmpegkalddsqatsiadtn
vsvtsanqyekiagsdvviitagltkvpgksdkewsrndllpfnakiirevaqgvkkycp
lafvivvtnpldcmvkcfheasglpknmvcgm

Sequence, based on observed residues (ATOM records):

>d1sovb1 c.2.1.0 (B:15-163) automated matches {Toxoplasma gondii [TaxId: 5811]}
gtvsrrkkiamigsgmiggtmgylcvlreladvvlfdvvtgmpegkalddsqatsiadtn
vsvtsanqyekiagsdvviitagltkvsrndllpfnakiirevaqgvkkycplafvivvt
npldcmvkcfheasglpknmvcgm

Timeline for d1sovb1:

• d1sovb1 first appeared in SCOPe 2.03
  
• d1sovb1 appears in SCOPe 2.04
  
• d1sovb1 appears in SCOPe 2.06
  
• d1sovb1 appears in the current release, SCOPe 2.08