SCOPe 2.04: Domain d4ffbb2: 4ffb B:244-432

Lineage for d4ffbb2 (4ffb B:244-432)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.0: automated matches [227141] (1 protein)
   not a true family

6. Protein automated matches [226843] (5 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224936] (2 PDB entries)

8. Domain d4ffbb2: 4ffb B:244-432 [221164]
   Other proteins in same PDB: d4ffba1, d4ffbb1
   automated match to d1jffb2
   complexed with gtp, mg

Details for d4ffbb2

PDB Entry: 4ffb, 2.88 Å

PDB Description: A TOG:alpha/beta-tubulin Complex Structure Reveals Conformation-Based Mechanisms For a Microtubule Polymerase

PDB Compounds: (B:) Tubulin beta chain

SCOPe Domain Sequences for d4ffbb2:

Sequence, based on SEQRES records:

>d4ffbb2 d.79.2.0 (B:244-432) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gqlnsdlrklavnlvpfprlhffmvgyapltaigsqsfrsltvpeltqqmfdaknmmaaa
dprngryltvaaffrgkvsvkevedemhkvqsknsdyfvewipnnvqtavcsvapqgldm
aatfianstsiqelfkrvgdqfsamfkrkaflhwytsegmdelefseaesnmndlvseyq
qyqeatved

Sequence, based on observed residues (ATOM records):

>d4ffbb2 d.79.2.0 (B:244-432) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gqlnsdlrklavnlvpfprlhffmvgyapltaigsltvpeltqqmfdaknmmaaadprng
ryltvaaffrgkvsvkevedemhkvqsknsdyfvewipnnvqtavcsvapqgldmaatfi
anstsiqelfkrvgdqfsamfkrkaflhwytsegmdelefseaesnmndlvseyqqyqea
tved

Timeline for d4ffbb2:

• d4ffbb2 first appeared in SCOPe 2.03
  
• d4ffbb2 appears in SCOPe 2.05
  
• d4ffbb2 appears in the current release, SCOPe 2.08