SCOPe 2.04: Domain d4akyb_: 4aky B:

Lineage for d4akyb_ (4aky B:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.26: VirB8-like [160029] (2 proteins)
   Pfam PF04335

6. Protein Type IV secretion system protein VirB8 [160030] (2 species)

7. Species Brucella melitensis [TaxId:29459] [160032] (3 PDB entries)
   Uniprot Q7CEG3 97-235

8. Domain d4akyb_: 4aky B: [201439]
   automated match to d4akya_
   complexed with 4ll

Details for d4akyb_

PDB Entry: 4aky, 2.6 Å

PDB Description: crystal structure of virb8 from brucella suis in complex with interaction inhibitor 2-(butylamino)-8-quinolinol

PDB Compounds: (B:) type IV secretion system protein virb8

SCOPe Domain Sequences for d4akyb_:

Sequence, based on SEQRES records:

>d4akyb_ d.17.4.26 (B:) Type IV secretion system protein VirB8 {Brucella melitensis [TaxId: 29459]}
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

Sequence, based on observed residues (ATOM records):

>d4akyb_ d.17.4.26 (B:) Type IV secretion system protein VirB8 {Brucella melitensis [TaxId: 29459]}
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtdgetthwiatigyqyvnpslmsesarltn
plgfnvtsyrvdpe

Timeline for d4akyb_:

• d4akyb_ first appeared in SCOPe 2.03
  
• d4akyb_ appears in SCOPe 2.05
  
• d4akyb_ appears in the current release, SCOPe 2.08