Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1689992Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1694480Fold e.23: Acetyl-CoA synthetase-like [56800] (1 superfamily)
    4 domains: (1&2) duplication: share the same alpha/beta fold; (3) beta-barrel; (4) alpha+beta
  4. 1694481Superfamily e.23.1: Acetyl-CoA synthetase-like [56801] (2 families) (S)
  5. 1694553Family e.23.1.0: automated matches [191594] (1 protein)
    not a true family
  6. 1694554Protein automated matches [191083] (8 species)
    not a true protein

Species:

  1. 1694555Acinetobacter baumannii [TaxId:557601] [189484] (5 PDB entries)
    1. Domains for 3o82:
      1. 1694564Domain d3o82a_: 3o82 A: [182863]
        automated match to d1md9a_
        complexed with ca, hp8
      2. 1694565Domain d3o82b_: 3o82 B: [182864]
        automated match to d1md9a_
        complexed with ca, hp8
    2. Domains for 3o83:
      1. 1694556Domain d3o83a_: 3o83 A: [182865]
        automated match to d1md9a_
        complexed with ca, ixn, mpd, mrd
      2. 1694557Domain d3o83b_: 3o83 B: [182866]
        automated match to d1md9a_
        complexed with ca, ixn, mpd, mrd
    3. Domains for 3o84:
      1. 1694560Domain d3o84a_: 3o84 A: [182867]
        automated match to d1md9a_
        complexed with ca, htj, mpd, mrd, pge
      2. 1694561Domain d3o84b_: 3o84 B: [182868]
        automated match to d1md9a_
        complexed with ca, htj, mpd, mrd, pge
    4. Domains for 3u16:
      1. 1694558Domain d3u16a_: 3u16 A: [217139]
        automated match to d3o83a_
        complexed with ca, h89, mpd, mrd
      2. 1694559Domain d3u16b_: 3u16 B: [217140]
        automated match to d3o83b_
        complexed with ca, h89, mpd, mrd
    5. Domains for 3u17:
      1. 1694562Domain d3u17a_: 3u17 A: [217141]
        automated match to d3o83a_
        complexed with ca, h90, mpd, mrd
      2. 1694563Domain d3u17b_: 3u17 B: [217142]
        automated match to d3o83b_
        complexed with ca, h90, mpd, mrd
  2. 1694566Burkholderia xenovorans [TaxId:266265] [225346] (1 PDB entry)
  3. 1694569Human (Homo sapiens) [TaxId:9606] [255628] (7 PDB entries)
    1. Domains for 2vze:
      1. 1694577Domain d2vzea_: 2vze A: [243959]
        automated match to d4eatb_
        complexed with amp, mg; mutant
      2. 1694578Domain d2vzeb_: 2vze B: [243960]
        automated match to d4eatb_
        complexed with amp, mg; mutant
      3. 1694579Domain d2vzec_: 2vze C: [243961]
        automated match to d4eatb_
        complexed with amp, mg; mutant
    2. Domains for 2wd9:
      1. 1694580Domain d2wd9a_: 2wd9 A: [244116]
        automated match to d4eata_
        complexed with ibp, mg; mutant
      2. 1694581Domain d2wd9b_: 2wd9 B: [244117]
        automated match to d4eata_
        complexed with ibp, mg; mutant
      3. 1694582Domain d2wd9c_: 2wd9 C: [244118]
        automated match to d4eata_
        complexed with ibp, mg; mutant
    3. Domain for 3b7w:
    4. Domain for 3c5e:
    5. Domain for 3day:
    6. Domains for 3eq6:
      1. 1694575Domain d3eq6a_: 3eq6 A: [245897]
        automated match to d4eatb_
        complexed with amp, bco; mutant
      2. 1694576Domain d3eq6b_: 3eq6 B: [245898]
        automated match to d4eatb_
        complexed with amp, bco; mutant
    7. Domains for 3gpc:
      1. 1694571Domain d3gpca_: 3gpc A: [246333]
        automated match to d4eatb_
        complexed with coa, mg; mutant
      2. 1694572Domain d3gpcb_: 3gpc B: [246334]
        automated match to d4eatb_
        complexed with coa, mg; mutant
  4. 1694583Mycobacterium tuberculosis [TaxId:1773] [226299] (1 PDB entry)
  5. 1694585Populus tomentosa [TaxId:118781] [225956] (3 PDB entries)
    1. Domain for 3a9u:
    2. Domain for 3a9v:
    3. Domain for 3ni2:
  6. 1694589Rhodopseudomonas palustris [TaxId:1076] [189027] (2 PDB entries)
    1. Domains for 3ivr:
      1. 1694592Domain d3ivra_: 3ivr A: [178635]
        automated match to d1t5dx_
        complexed with cl, gol
      2. 1694593Domain d3ivrb_: 3ivr B: [178636]
        automated match to d1t5dx_
        complexed with cl, gol
    2. Domains for 4eat:
      1. 1694590Domain d4eata_: 4eat A: [234367]
        automated match to d2v7ba_
        complexed with bez, edo, gol
      2. 1694591Domain d4eatb_: 4eat B: [234368]
        automated match to d2v7ba_
        complexed with bez, edo, gol
  7. 1694594Rhodopseudomonas palustris [TaxId:258594] [226421] (4 PDB entries)
    1. Domains for 4fuq:
      1. 1694595Domain d4fuqa_: 4fuq A: [221539]
        automated match to d2qvzx_
        complexed with gol, so4
      2. 1694596Domain d4fuqb_: 4fuq B: [221540]
        automated match to d2qvzx_
        complexed with gol, so4
      3. 1694597Domain d4fuqc_: 4fuq C: [221541]
        automated match to d2qvzx_
        complexed with gol, so4
      4. 1694598Domain d4fuqd_: 4fuq D: [221542]
        automated match to d2qvzx_
        complexed with gol, so4
    2. Domain for 4fut:
    3. Domains for 4gxq:
      1. 1694601Domain d4gxqa_: 4gxq A: [222263]
        automated match to d2qvzx_
        complexed with atp, co3, mg
      2. 1694602Domain d4gxqb_: 4gxq B: [222264]
        automated match to d2qvzx_
        complexed with atp, co3, mg
      3. 1694603Domain d4gxqc_: 4gxq C: [222265]
        automated match to d2qvzx_
        complexed with atp, co3, mg
    4. Domain for 4gxr:
  8. 1694604Streptomyces sp. [TaxId:1931] [256140] (3 PDB entries)
    1. Domain for 3vnq:
    2. Domain for 3vnr:
    3. Domain for 3vns:

More info for Protein automated matches from e.23.1.0: automated matches

Timeline for Protein automated matches from e.23.1.0: automated matches: